@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : G22_113440T0_kcl57: (2019-03-29 )
CVIGLTFNGNWVPNNRFVISPGGKFSFIANYVIIPVRLDESCHWHQDLAENAKPVIIPSGYGIKSC
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------....--...-..10.------.----....--------..20.--------......-.30------..-------------.-------------.....40---.......--.--.50.---.---....-----..60....---.-----------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------
C
V
I
G
--
L
T
F-N
G
N
WV------P----NN
R
F
--------
V
ISPG--------G
K
F
S
F
I
-
A
N
Y
------
V
I
-------------
I
-------------
P
V
RLDE----SC
H
W
H
Q
D
--
L
--AENA---K---
P
V
I
I-----PSGYGIKS---C-----------------------------------------------------------------------------------------------------------
46
SP3
78.85
22%
-35
- C13 -
-
1QRE
-
CAH_METTE
A:
[38-247]
------------T
V
D
E
F
S
N
I
R
E
N
P
VTPWNP
E
P
S
A
P
V
I
D
PT
A
Y
I
D
PQ
A
S
V
I
G
E
V
T
I
G
A
N
V
M
V
S
P
M
A
S
I
R
SDEG
M
P
I
F
V
G
D
R
S
N
V
Q
D
G
V
V
L
H
A
L
ETINEEGEPIEDN
I
V
E
V
DGKEYA
V
Y
I
G
------
N
N
V
S
L
------
A
----
H
Q
S
Q
--------
V
H
G
P
A
A
V
------
G
D
D
T
F
I
G
M
Q
A
------
F
V
-------------
F
-------------
K
S
K
V
G
N
----
N
C
V
------
L
--
E
P
R
S
A
A
-
I
---
G
V
T
I
-----
P
D
G
R
Y
I
P
A
---
G
MVVTS
Q
A
E
A
D
K
L
P
E
V
T
DDYAYSH
T
N
E
A
V
V
Y
V
N
V
H
L
A
E
G
Y
K
E
T
S----------------------------------------------------------------
55
SP3
78.14
18%
6
- C13 -
-
1HM9
1
GLMU_STRPN
A:
[261-468]
-----------------------------------------------------------------------------------------------
V
S
F
VNPEA
T
Y
I
D
ID
V
E
I
A
P
E
V
Q
I
E
A
N
V
I
L
-
K
G
Q
T
K
------
I
----
G
A
E
T
--------
V
L
T
N
G
T
Y
V
V
D
S
T
I
G
A
G
A
V
I
-
T
N
S
------
M
I
-------------
E
-------------
E
S
S
V
A
D
----
G
V
T
V
G
P
Y
A
H
I
--
R
P
N
S
S
L
G
A
---
Q
V
H
I
-----
G
N
F
V
E
V
K
G
---
S
S
I
G
E
NTKAGHL
T
Y
I
G
NCE
V
G
S
N
V
N
F
G
A
G
T
I
T
V
N
Y
DGK
N
K
Y
K
T
V
I
G
D
N
V
F
V
G
S
N
S
T
I
I
A
P
V
E
L
G
D
N
S
L
V
G
AGSTIT
K
D
V
P
AD
A
I
A
I
G
R
G
R
Q
I
N
K
D
EYATRLPHHPKNQ
40
Fugue
67.32
23%
-64
- C7 -
0.19
2JVE
-
?
A:
[18-88]
------------------------------------------------------------------------------------------------------------------M
A
L
K
C
--
F
T
R
-
N
G
D
-------------
D
R
T
V
--------
T
T
C
A
E
--------
E
Q
T
R
C
L
---
F
------
V
Q
-------------
L
-------------
P
Y
S
E
I
Q
----
E
C
K
T
V
Q
Q
--
C
--
A
E
V
L
---
E
---
E
V
T
------
A
I
G
Y
P
A
K
C
---
C
C
E
DLCNRSEQ-------------------------------------------------------------------------------------------------
47
SP3
66.62
16%
-40
- C13 -
-
1J2Z
2
LPXA_HELPY
A:
[2-260]
------------SKIAKT
A
I
I
S
PK
A
E
I
N
K
G
V
E
I
G
E
F
C
V
I
G
DG
V
K
L
D
E
G
V
K
L
H
N
N
V
T
L
Q
G
H
T
F
V
G
K
N
T
E
I
F
P
FAVLGTQPQDLKYKG
E
Y
S
E
L
I
I
G
E
D
N
L
I
R
E
F
C
M
I
N
P
G
T
EGGIK
K
T
L
I
G
------
D
K
N
L
L
------
M
----
A
Y
V
---------
H
V
A
H
D
C
V
I
-----
G
S
H
C
I
L
-
A
N
G
------
V
T
-------------
L
A
G
-----------
H
I
E
I
G
D
----
Y
V
N
------
I
--
G
G
L
T
---
A
I
H
Q
F
V
R
I
-----
A
K
G
C
M
I
A
G
---
K
S
A
L
G
K
D
V
P
P
Y
C
T
V
E
G
NR
A
F
I
RGLN
R
H
R
M
R
Q
L
L
E
S
K
D
I
D
F
I
Y
A
L
Y
K
R
L
F
RPIPS
L
R
E
S
A
K
L
E
L
E
E
H
ANN
P
F
V
K
E
I
C
S
F
I
L
E
SSRGVAYKSS-----------------
53
SP3
60.59
19%
-44
* C13 *
-
1V3W
4
?
A:
[1-173]
---------------------------------------------------------------------------------------------MA
I
Y
E
I
NG
K
K
P
R
I
H
PS
A
F
V
D
EN
A
V
V
I
G
D
V
V
L
E
E
K
T
S
V
W
-----
P
----
S
A
V
L
--------
R
G
D
I
E
Q
I
Y
V
----
G
K
Y
S
N
V
-
Q
D
N
------
V
S
-------------
I
H
T
S
HG
Y
-------
P
T
E
I
G
E
----
Y
V
T
------
I
--
G
H
N
A
M
V
-
H
---
G
A
K
V
-----
G
N
Y
V
I
I
G
I
---
S
S
V
I
L
D
G
A
K
I
G
D
H
V
I
I
G
AG
A
V
V
P
P
N
K
E
I
P
D
Y
S
L
V
L
G
VPGKVV
R
Q
L
T
E
E
E
I
E
W
T
K
K
N
A
E
I
Y
V
E
L
A
E
K
H
I
K
GRKRI----------------------------------
35
Fugue
54.68
18%
-6
- C7 -
0.45
2BOS
-
?
A:
[1-68]
-----------------------------------------------------------------------------------------------------------------AD
C
A
K
G
--
K
I
E
-
F
S
K
Y
N
------
E
----
D
N
T
F
--------
T
V
K
V
S
--------
G
R
E
Y
W
T
-
N
R
W
----------------------------------------
N
----
L
Q
P
L
L
Q
S
--
A
--
Q
L
T
G
---
M
---
T
V
T
I
I
S
NTC
S
S
G
S
G
F
A
E
---
V
Q
F
N--------------------------------------------------------------------------------------------------------
31
Fugue
54.68
18%
-6
- C7 -
0.45
2BOS
-
?
A:
[1-68]
-----------------------------------------------------------------------------------------------------------------AD
C
A
K
G
--
K
I
E
-
F
S
K
Y
N
------
E
----
D
N
T
F
--------
T
V
K
V
S
--------
G
R
E
Y
W
T
-
N
R
W
----------------------------------------
N
----
L
Q
P
L
L
Q
S
--
A
--
Q
L
T
G
---
M
---
T
V
T
I
I
S
NTC
S
S
G
S
G
F
A
E
---
V
Q
F
N--------------------------------------------------------------------------------------------------------
32
Fugue
53.22
18%
-61
- C7 -
0.17
3H8H
2
A:
[6-112]
-------------------------------------------------------------------------------------------------------------------
S
E
I
E
--
L
V
F
-
R
P
H
P
T
------
L
MEKA
Q
T
R
Y
--------
I
K
T
S
G
N-------
A
T
V
D
H
L
-
S
K
Y
------
L
A
-------------
V
-------------
R
L
A
L
E
E
---------
L
T
--
A
--
S
E
K
Q
---
Y
---
T
I
Y
I
-----
A
T
A
S
G
Q
F
T
---
V
L
N
GSFS
L
E
L
V
S
E
K
YWKVNKPME
L
Y
Y
A---------------------------------------------------------------------------------
2
PsiBlast_PDB
52.71
36%
-90
* C10 *
-
3H09
-
IGA0_HAEIN
A:
[799-839]
-----------------------------------------------------------------------------------------------------------------------------
N
V
N
L
S
------
G
----
N
A
N
F
--------
V
L
G
K
A
--------
N
L
F
G
T
I
-
S
G
T
------
G
N
-------------
S
-------------
Q
V
R
L
T
E
----
N
S
H
W
H
--------------------------------------------------------------------------------------------------------------------------------------------------
48
SP3
50.31
16%
-39
- C13 -
-
1KRR
2
THGA_ECOLI
A:
[2-201]
-----------------------------------------NMP
M
T
E
R
I
R
A
G
K
L
F
T
D
MCEG
L
P
E
K
R
L
R
G
K
T
L
M
Y
E
F
N
H
SHPSE
V
E
K
R
E
S
L
I
K
E
M
F
ATVGEN
A
W
V
E
P
PVYFSYGSN
I
H
I
G
------
R
N
F
Y
A
------
N
----
F
N
L
T
--------
I
V
D
D
Y
T
V
T
I
----
G
D
N
V
L
I
-
A
P
N
------
V
T
-------------
L
S
------------
V
T
G
H
P
V
----
H
H
E
L
R
K
N
--
G
--
E
M
Y
S
---
F
---
P
I
T
I
-----
G
N
N
V
W
I
G
S
---
H
V
V
I
N
P
G
V
T
I
G
D
N
S
V
I
G
A
GSIVT
K
D
I
P
P
N
V
V
A
A
G
VPCRVIREIND
R
D
K
H
Y
YFKD
Y
K
V
E
S-------------------------------------------------
38
Fugue
49.96
15%
-20
- C7 -
0.18
1S12
-
?
A:
[1-94]
--------------------------------------------------------------------------------------------------------------------
M
I
K
--
V
T
V
-
T
N
S
F
F
E
V
T
G
H
A
P
----
D
K
T
L
--------
C
A
S
V
S
--------
L
L
T
Q
H
V
-
A
N
F
------
L
K
A
E
KK
A
K
I
K
K
E
SG
Y
L
-------------
K
V
K
F
E
E
LE
N
C
E
V
K
V
L
A
A
--
M
--
V
R
S
L
---
K
---
E
L
E
Q
-----
K
F
P
S
Q
I
R
V
---
E
V
I
D
N
G
S-----------------------------------------------------------------------------------------------------
34
Fugue
49.11
16%
-57
- C3 -
-
2MM2
-
?
A:
[1-65]
------------------------------------------------------------------------------------------------------------------N
C
T
A
N
--
I
L
N
-
I
N
E
V
V
------
I
----
A
T
G
C
--------
V
P
A
G
G
--------
N
L
I
I
R
V
-
G
S
D
------
H
S
-------------
Y
-------------
L
I
R
A
T
V
----
S
C
G
L
S
L
N
--
P
--
S
Q
S
-----------
F
-----
I
N
G
E
S
L
A
S
G
G
R
C
-----------------------------------------------------------------------------------------------------------
12
HHSearch
48.72
14%
-129
- C7 -
0.04
2Y8U
-
?
B:
[34-83]
--------------------------------------------------------------------------------------------------------------------
T
I
A
--
L
T
F
-
D
D
G
P
S
------
E
----
Y
T
P
Q
--------
L
L
D
L
L
--------
S
R
Y
S
A
R
-
A
T
F
------
F
V
-------------
L
-------------
G
D
A
A
A
Q
----
N
P
G
L
L
Q
R
--
M
--
R
D
E
----------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
48.58
20%
-48
- C7 -
0.31
2HW4
15
PHP14_HUMAN
A:
[30-88]
-----------------------------------------------------------------------------------------------------------------------------------------------
D
V
--------
D
I
D
S
D
--------
G
V
F
K
Y
V
-
L
I
R
------
V
H
-------------
S
AE
S
K
E
--------
I
V
R
G
Y
K
----
W
A
E
Y
H
A
D
--
I
--
Y
D
K
V
---
S
---
G
D
M
Q
-----
K
Q
G
C
-------------------------------------------------------------------------------------------------------------------
13
HHSearch
47.70
14%
-115
- C7 -
0.13
2Y8U
-
?
A:
[34-83]
--------------------------------------------------------------------------------------------------------------------
T
I
A
--
L
T
F
-
D
D
G
P
S
------
E
----
Y
T
P
Q
--------
L
L
D
L
L
--------
S
R
Y
S
A
R
-
A
T
F
------
F
V
-------------
L
-------------
G
D
A
A
A
Q
----
N
P
G
L
L
Q
R
--
M
--
R
D
E
----------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
46.22
20%
-6
- C7 -
0.33
2AI6
-
PHP14_HUMAN
A:
[11-68]
-----------------------------------------------------------------------------------------------------------------------------------------------
D
V
--------
D
I
D
S
D
--------
G
V
F
K
Y
V
-
L
I
R
------
V
H
-------------
S
APRSGAPAA
E
S
K
E
I
V
R
G
Y
K
----
W
A
E
Y
H
A
D
--
I
--
Y
D
K
V
---
S
---
G
D
M
Q
-----
K
Q
G
--------------------------------------------------------------------------------------------------------------------
8
HHSearch
45.11
21%
-284
- C2 -
-
5E9P
-
?
A:
[49-80]
----------------------------------------------------------------------------------------------------------------------
G
--
T
D
Y
-
T
N
V
W
V
------
A
----
Q
H
Q
I
P
A
A
SDG
Y
W
Y
I
H
Y
K
--------
S
G
V
S
W
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
44.70
12%
-134
- C7 -
0.10
2K2P
-
?
A:
[22-85]
---------------------------------------------------------------------------------------------------------------------
A
G
--
L
S
F
-
H
V
E
D
M
------
T
----
C
G
H
C
--------
A
G
V
I
K
--------
G
A
I
E
K
T
-
V
P
G
------
A
A
-------------
V
-------------
H
A
D
P
A
S
----
R
T
V
V
V
G
G
--
V
SD
A
A
H
I
---
A
---
E
I
I
T
-----
A
A
G
Y
T
P
E
----------------------------------------------------------------------------------------------------------------
51
SP3
43.89
12%
2
- C4 -
-
1VZW
1
HIS4_STRCO
A:
[2-240]
S
K
L
E
L
L
P
A
V
D
V
R
DGQAVRETSYGS
P
L
E
A
A
L
A
W
Q
R
S
GAE
W
L
H
L
V
D
L
D
A
A
F
GTGDN
R
A
L
I
A
E
V
A
Q
A
MD
I
K
V
E
L
S
G
GIRD
D
D
T
L
A
A
A
L
A
T
GCT
R
V
N
L
G
T
A
A
L
E
T
P
E
W
V
A
K
V
I
A
E
HGDK
I
A
V
G
--
L
D
V
-
R
G
T
T
L
------
R
----
G
R
G
W
--------
T
R
D
G
G
--------
D
L
Y
E
T
L
-
D
R
L
N
K
E
GCA
R
Y
-------------
V
-------------
V
T
D
I
G
P
----
N
L
E
L
L
K
N
--
V
--
C
A
A
T
---
D
---
R
P
V
V
-----
A
S
G
-
G
V
S
S
---
L
D
D
L
R
A
I
A
G
L
V
PAGVE
G
A
I
V
G
K
A
L
Y
A
KAFT
L
E
E
A
L
E
A
T
S---------------------------------------------------------------------
1
PsiBlast_PDB
40.94
35%
-16
* C5 *
-
3ZS6
-
?
A:
[185-221]
-------------------------------------------------------------------------------------------------------------------------------
D
W
Q
------
P
----
N
N
R
I
--------
V
M
A
K
S
--------
D
K
Y
W
N
A
-
R
N
V
------
V
I
R
K
V
T
Y
--------
L
-------------
P
I
E
N
D
E
----
T
------------------------------------------------------------------------------------------------------------------------------------------------------