@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : GN0001_038540T0_kcl43: (2019-03-29 )
PHPECEVTIMKPGTPSPRSPYTLPEEYGRGYGPGDSKTKIKVGSYFCVTDSHCIPNCGKLPNNNWYADGA
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------........----.-10.....----.-.-..20---......-----.-.-30--------..---.---...-----.---..40-.-----------.......50----.....---...-----60-----.....--....70
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------PHPE
C
E
V
T
----
I
-M-KPGTP----S-P-RSPY---T
L
P
E
E
Y-----G-R-G---------YG---P---GDS-----
K
---
T
K
I
K
-
V
-----------
G
S
Y
F
C
V
TDS----HCIPN---CGK-----L------PNNNW--YADGA
31
SP3
65.10
21%
141
- C15 -
-
1QUB
-
APOH_HUMAN
A:
[244-319]
----------------------------------------------------------------------------------------------SC
K
V
P
V
K
K
A
T
----
V
-
V
-
Y
Q
G
E
R
--------
V
K
I
Q
------
E
K
F
-----
K
-
N
-
G
---------
M
L
---
H
---
G
D
K
VSFFC
K
---
N
K
E
K
-
K
-----------
C
S
Y
T
E
D
A
------
Q
C
I
D
G
---
T
I
E
-----
V
------
P
K
C
----
F
K
E
H
T
38
Fugue
64.79
18%
64
* C12 *
-
1FWQ
-
MSS4_HUMAN
A:
[9-123]
-----------------------------------------------------------------------------------ELVSAEGRNRKAV
L
C
Q
R
C
G
S
R
----
V
-
L
-
Q
P
G
T
A
----
L
F
S
-
R
R
Q
L
---
F
L
P
S
M
R
-----
K
-
K
P
A
---------
L
S
---
D
---
G
S
N
-----
P
---
D
G
D
L
-
L
-----------
Q
E
H
W
L
V
E
D
M
----
F
I
F
E
N
---
V
G
F
-----
T
------
K
D
V
------
G
N
I
47
Fugue
64.36
22%
28
- C11 -
0.29
4CU5
-
?
A:
[186-270]
---------------------------------------------------------------------------------------------------
M
Y
K
H
T
----
I
-
V
-
Y
D
G
E
V
----
D
-
K
-
I
S
A
T
---
V
V
G
W
G
Y
-----
N
-
D
-
G
KILICDIKD
Y
V
---
P
---
G
Q
T
-----
Q
---
N
L
Y
V
-
V
-----------
G
G
G
A
C
E
K
I
S
----
S
I
T
K
E
---
K
F
I
-----
M
------
I
K
G
N
D
--
R
F
D
T
L
41
Fugue
63.19
23%
9
- C11 -
0.06
4ZC4
-
LARP1_HUMAN
A:
[12-158]
------------------------------------------------------------------------------------------------
Q
H
P
S
H
E
L
L
----
K
-
E
-
N
G
F
T
Q
----
H
-
V
-
Y
H
K
Y
RRR
C
L
N
E
R
K
-----
R
-
L
-
G
---------
I
G
---
Q
S--
Q
E
M
-----
N
---
T
L
F
R
-
F
-----------
W
S
F
F
L
R
D
H
----------------------------
F
N
K
K
M
--
Y
E
E
F
K
46
Fugue
61.74
23%
-11
- C11 -
0.10
1BOW
-
BMRR_BACSU
A:
[1-158]
-------------------------------------------------------RLGEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIE
S
N
N
S
Y
G
A
T
----
F
S
F
-
Q
P
Y
T
S
----
I
-
D
-
E
M
T
Y
RH-
I
F
T
P
V
L
-----
I
-
S
-
S
---------
I
T
---
P
---
D
M
E
-----
I
---
T
T
I
P
-
K
-----------
G
R
Y
A
C
I
A
Y
N
FSPE
H
Y
F
L
N
---
L
Q
K
-----
L
------
I
K
--
Y
--
I
A
D
R
Q
52
Fugue
61.58
18%
120
- C11 -
0.22
5H3W
-
?
A:
[1-281]
DRVAQQANELIKRVASELEKNRKKLIKQEQELADTETAELVRQKGELLSQNAQRYFKKYQKLKEAVKHLTNLIEETKSTIVYLESVDTMLGQASLA
E
I
D
E
I
R
E
E
----
L
-
I
-
E
T
G
Y
L
----
K
-
R
-
R
H
R
E
---
K
I
H
K
R
Q
-----
K
P
E
-
R
---------
Y
L
---
A
---
T
D
G
-----
K
---
T
I
I
L
-
V
-----------
G
K
N
N
L
Q
N
D
E
----
L
T
F
K
M
---
A
K
K
------------
G
E
L
W
F
--
H
A
K
D
I
36
SP3
56.61
18%
38
- C10 -
-
1GVP
-
?
?:
[1-87]
-------------------------------------------------------------------------------------------MIKVE
I
K
P
S
Q
A
Q
F
----
T
-
T
-
R
S
G
V
S
----
R
-
Q
-
G
K
P
Y
---
S
L
N
E
Q
L
-----
C
-
Y
-
V
---------
D
L
---
G
---
N
E
Y
-----
P
---
V
L
V
K
-
I
TLDEGQPAYAP
G
L
Y
T
V
H
L
S
S
----
F
K
V
G
Q
---
F
G
S
-----
L
------
M
I
D
R
L
--
R
L
V
P
A
4
PsiBlast_PDB
54.95
25%
-43
* C16 *
-
4XNZ
-
IGHG1_HUMAN
H:
[68-125]
------------------------------------------------------------------------------------------------------
V
S
----
M
-
T
-
R
Q
L
S
---------
D
D
P
--------
D
W
-----
G
-
V
-
A
---------
Y
L
---
D
---
F
S
G
-----
L
---
T
S
G
D
-
T
-----------
G
E
Y
F
C
V
R
K
G
----
P
S
C
P
H
---
C
G
D
-----
F
------
H
W
Q
H
W
-------
3
PsiBlast_PDB
54.75
26%
98
- C13 -
-
4Q8L
-
?
A:
[159-203]
-----------------------------------------------------------------------------------------------------------------------------------------
F
-----
G
-
N
-
S
---------
F
G
IPV
E
---
D
D
S
-----
Q
---
S
Y
F
K
-
F
-----------
G
N
Y
L
Q
S
Q
D
P
----
Y
T
L
D
K
---
C
G
E
-----
A
------
G
N
S
N
S
--
F
K
N
--
51
Fugue
54.66
14%
25
- C11 -
0.37
4PWU
1
MZRA_KLEP7
A:
[3-78]
------------------------------------------------------------------------------------------------
Q
Q
Q
E
A
T
L
A
----
I
-
R
-
P
V
G
Q
G
----
I
-
G
M
P
D
G
F
---
S
V
W
H
H
L
-----
D
-
A
-
N
---------
G
I
---
R
---
F
K
S
-----
I
---
T
P
Q
K
-
D
-----------
G
L
L
I
K
F
D
S
T
----
A
Q
G
A
A
---
A
K
E
VLGRA
L
------
P
H
G
Y
I
--
I
A
L
L
E
29
SP3
54.56
12%
56
* C15 *
-
1WEP
-
PHF8_MOUSE
A:
[1-79]
--------------------------------------------------------------------------------------------GSSG
S
S
G
M
A
L
V
P
----
V
-
Y
C
L
C
R
Q
P
----
Y
N
V
-
N
H
F
M
---
I
E
C
G
L
C
-----
Q
-
D
-
W
---------
F
H
---
G
SCV
G
I
E
-----
E
---
E
N
A
V
D
I
-----------
D
I
Y
H
C
---
P
----
D
C
E
A
V
---
F
G
P
-----
S
------
I
M
K
N
W
--
H
S
G
P
S
2
PsiBlast_PDB
54.50
26%
109
- C13 -
-
4Q8K
-
?
A:
[301-345]
-----------------------------------------------------------------------------------------------------------------------------------------
F
-----
G
-
N
-
S
---------
F
G
IPV
E
---
D
D
S
-----
Q
---
S
Y
F
K
-
F
-----------
G
N
Y
L
Q
S
Q
D
P
----
Y
T
L
D
K
---
C
G
E
-----
A
------
G
N
S
N
S
--
F
K
N
--
27
SP3
54.26
18%
50
* C17 *
-
1R79
-
A:
[1-84]
------------------------------------------------------------------------------------------------
G
S
S
G
S
S
G
T
TLAS
I
-
G
-
K
D
I
I
-----
E
-
D
-
A
D
G
I
---
A
M
P
H
Q
W
-----
L
-
E
-
G
---------
N
L
---
P
---
V
S
A
-----
K
CTV
C
D
K
T
-
C
-----------
G
S
V
L
R
L
Q
D
W
----
R
C
L
-
W
---
C
K
A
-----
M
VHTSCK
E
S
L
L
T
--
K
C
S
G
P
1
PsiBlast_PDB
53.86
26%
108
* C13 *
-
1J1T
-
?
A:
[165-209]
-----------------------------------------------------------------------------------------------------------------------------------------
F
-----
G
-
N
-
S
---------
F
G
IPV
E
---
D
D
S
-----
Q
---
S
Y
F
K
-
F
-----------
G
N
Y
L
Q
S
Q
D
P
----
Y
T
L
D
K
---
C
G
E
-----
A
------
G
N
S
N
S
--
F
K
N
--
35
SP3
50.45
17%
43
- C9 -
-
1GKN
-
CR1_HUMAN
A:
[897-960]
---------------------------------------------------------------------------------------------------
E
A
E
----------
A
H
C
Q
A
----
P
-
D
-
H
F
L
F
A--
K
L
K
T
Q
T
-----
T
-
A
-
S
---------
D
F
---
P
---
I
G
T
--------------
S
-----------
L
K
Y
E
C
R
P
E
Y
----
Y
G
R
P
F
SIT
C
-------
L
------
D
N
L
V
W
SS
P
K
D
V
C
28
SP3
50.30
18%
108
- C6 -
-
1LV3
-
YACG_ECOLI
A:
[4-68]
-----------------------------------------------------------------------------------------MSETITV
N
C
P
T
C
-------------
G
K
T
----
V
-
V
-
W
G
E
---------------
I
-
S
-
P
---------
F
R
---
P
---
F
C
S
-----
K
RC-
Q
L
I
D
-
L
-----------
G
E
W
--
A
A
E
E
----
K
R
I
P
S
---
S
G
D
-----
L
S-----
E
S
D
D
W
--
S
E
E
P
K
33
SP3
47.95
12%
89
- C15 -
-
1WIG
-
A:
[1-73]
------------------------------------------------------------------------------------------GSSGSS
G
C
D
S
C
E
K
Y
----
I
-
T
-
G
R
V
L
E
----
A
-
G
-
E
K
H
Y
---
H
-
P
S
C
A
LCVRC
G
-
Q
-
M
---------
F
A
---
E
---
G
E
E
-----
M
---
Y
L
Q
G
-------------
S
S
I
W
H
P
A
C
R
----
Q
A
A
R
T
---
E
D
S
-----
G
------
P
S
S
G
--------
39
Fugue
44.31
10%
49
- C11 -
0.21
2JV2
-
?
A:
[8-83]
------------------------------------------------------------------------------------------------
E
G
V
I
M
S
E
L
----
K
-
L
-
K
P
L
P
K
VELP
P
-
D
-
F
V
D
V
---
I
R
I
K
L
Q
-----
G
-
K
-
T
---------
V
R
---
T
---
G
D
V
-----
I
---
G
I
S
I
-
L
-----------
G
K
E
V
K
F
K
V
V
----
Q
A
Y
P
S
---
P
L
R
-----
V
------
E
D
R
T
K
--
I
T
L
V
T
30
SP3
42.98
15%
65
- C7 -
-
1NAY
-
?
A:
[106-161]
-------------------------------------------------------------------------------------------GPPGP
P
G
P
P
G
P
P
G
--------
P
P
G
P
P
----
G
-
P
-
P
G
P
P
---
G
P
P
G
S
G
-----
Y
-
I
-
P
---------
E
A
---
P
---
R
D
G
-----
Q
---
A
Y
V
R
-
K
D----------
G
E
W
V
L
L
S
T
F
----
L
----------------------------------
50
Fugue
41.50
10%
-39
- C11 -
0.11
1S0Y
1
?
B:
[2-56]
------------------------------------------------------------------------------------------------
P
F
I
E
C
H
I
A
----
T
-
G
-
L
S
V
A
R
----
K
-
Q
-
Q
L
I
R
---
D
V
I
D
V
T
-----
N
-
K
-
S
---------
I
G
---
S
---
D
P
K
-----
I
---
I
N
V
L
-
L
-----------
V
E
H
---------------------------------
A
E
A
N
M
--
S
I
S
G
R