@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : GN0001_047070T0_kcl36: (2019-03-29 )
PSKPDYSAPRYWIEKCIVQLLDATTGEIVMERFSSGFGVWDSVSYLGHTYRFRLDQDCKTIWGDSRGSI
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-....--...-.10..------.......20..---..--------....--30......---.-----.-----40----...-.....50.....--..---.60..--.-..----...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-SKPD--YSA-
P
R
-
Y
W
------
I
E
K
C
I
V
Q
L
L
DA---T
T
--------
G
E
I
V
--
M
E
R
F
SSGF---G-----V-----
W
D
----
S
V
S
-
Y
LG
H
T
Y
R
F
RLDQ--
D
C
---
K
T
I
WG--D-SR----GSI
36
Fugue
69.90
20%
-49
- C10 -
0.33
2V75
-
NAB2_YEAST
A:
[6-94]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTENLKVIVAEKL
A
-
G
I
P
N
--
F
N
E
-
D
I
-
K
Y
------
V
A
E
Y
I
V
L
L
I
V
N
G--
G
T
--------
V
E
S
V
--
V
D
E
L
A
S
L
F
---
D
SVSRD
T
-----
L
A
----
N
V
V
-
Q
T
A
F
F
A
L
E
A
L
Q
Q
GE
S
A
---
E
N
I
V
S
--
K
-
I
R
----
M
M
-
22
SP3
66.10
20%
48
- C10 -
0.10
1I27
-
A:
[1-73]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
P
L
G
S
G
D
--
V
Q
V
-
T
-----------
E
D
A
V
R
R
Y
L
T
R
KPM
T
T
--------
K
D
L
L
KK
F
Q
T
K
K
T
G
L
---
S
-----
S
-----
E
Q
----
T
V
N
-
V
L
A
Q
I
L
K
-
R
L
N
P
--
E
R
---
K
M
I
N
D
--
K
-
M
H
----
F
S
L
34
Fugue
61.97
26%
-27
- C10 -
0.16
2JGP
2
A:
[1-520]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
E
--
Y
V
A
-
P
R
-
S
V
------
W
E
A
R
L
A
Q
V
W
E
Q
---
V
L
--------
N
---------
V
P
Q
V
---
G
-----
A
-----
L
D
----
D
F
F
-
A
L
G
--------------------
G
--
H
-
S
L
----
R
A
M
24
SP3
61.57
14%
-134
- C10 -
0.09
1X9B
-
?
A:
[1-53]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
N
--
L
S
-------------
D
R
A
K
F
E
S
M
I
N
S
---
P
S
--------
K
S
V
F
--
V
R
N
L
N
E
-----------
L
-----
E
A
----
L
A
V
-
R
L
G
K
S
Y
R
I
Q
L
D
Q
---
A
---
K
E
K
W
K
--
V
-
K
--------
23
SP3
61.13
15%
-81
- C10 -
0.20
1J5Y
-
NIAR_THEMA
A:
[16-79]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
-
V
R
-
Q
E
------
R
L
K
S
I
V
R
I
L
E
R
---
S
K
--------
E
P
V
S
--
G
A
Q
L
A
E
E
L
---
S
-----
V
SRQVI
V
Q
----
D
I
A
-
Y
L
--------
R
S
--
L
G
---
Y
N
I
V
A
--
T
-
P
R
----
G
Y
V
25
SP3
59.60
14%
-47
- C10 -
0.11
1WI9
-
A:
[98-169]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
S
S
G
S
--
S
G
-------------
F
L
T
E
F
I
N
Y
I
K
----
K
S
--------
K
V
V
L
--
L
E
D
L
A
F
Q
M
---
G
-----
L
RT---
Q
D
----
A
I
N
-
R
I
Q
D
L
----
L
T
E
--
G
-----
T
L
T
G
VI
D
-
D
R
----
G
K
F
39
Fugue
57.03
18%
-112
- C10 -
0.19
2NSW
-
MEN2_EUPNO
A:
[1-60]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
-
I
E
D
F
--
Y
T
S
-------------
E
T
C
P
Y
K
-------
N
D
--------
S
Q
L
A
--
W
D
T
C
S
G
G
T
---
G
-----
N
-----
C
G
----
T
V
--
C
C
G
Q
C
F
S
F
P
V
S
Q
--
S
C
---
A
G
M
A
D
--
S
-
N
D
----
C
P
N
29
SP3
56.79
20%
-59
* C11 *
-
1GOI
2
CHIB_SERMA
A:
[447-498]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
P
I
--
M
T
A
-
P
A
-
Y
---------------
V
P
G
---
T
T
-----------------
Y
A
Q
G
-----------------
A
----
L
V
S
-
Y
Q
G
Y
V
W
Q
T
K
W
G
Y
--
I
T
---
S
A
P
G
S
--
D
-
S
A
WLKV
G
R
V
26
SP3
56.62
18%
26
- C10 -
0.13
1FSE
-
GERE_BACSU
A:
[8-74]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
P
L
--
L
T
------
K
------
R
E
R
E
V
F
E
L
L
V
Q
DK-
T
T
--------
K
E
I
A
--
S
E
---
L
F
I
---
S
-----
E
-----
K
T
----
V
R
N
-
H
I
S
N
A
M
Q
-
K
L
G
V
--
K
G
RSQ
A
V
V
E
L
--
L
-
R
M
----
G
E
L
27
SP3
53.12
13%
-7
- C10 -
0.22
1E7L
-
END7_BPT4
A:
[104-157]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
H
P
N
----------
F
------
V
G
D
K
S
K
E
F
S
R
L
---
G
K
--------
E
E
M
M
--
A
E
M
L
Q
R
G
F
---
E
-----
Y
NE---
S
D
----
T
K
T
-
Q
L
I
A
S
F
K
K
Q
L
R
K
--
S
L
---
K
-----------------
28
SP3
52.95
23%
-38
- C10 -
1IUF
-
ABP1_SCHPO
A:
[-2-75]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMG
K
-
I
K
R
R
AI
T
E
H
-
E
K
-
R
A
------
L
R
H
Y
F
F
Q
L
Q
N
R
---
S
G
--------
Q
Q
D
L
--
I
E
W
F
R
E
K
F
---
G
KDI--
S
-----
Q
P
----
S
V
S
Q
I
L
S
S
K
Y
S
Y
-
L
D
N
--
T
V
---
E
K
P
W
D
--
V
-
K
R
----
N
R
-
38
Fugue
51.79
27%
57
- C10 -
5LPH
-
CE104_HUMAN
A:
[26-285]
----------------------------------------------------------------------------------------------------------------------------------------------------------LGEPEPLTEKALREASSAIDVLGETLVAEAYCKTWSYREDALLALSKKLMEMPVGTPKEDLKNTLRASVFLVRRAIKDIVTSVFQASLKLLKMIITQYIPKHKLSKLETAHCVERTIPVLLTRTGDSSARLRVTAANFIQEMALFKEVKSLQIIPSYLVQPLK
A
-
N
S
S
V
--
H
L
A
M
S
Q
M
G
L
------
L
A
R
L
L
K
D
L
------
G
T
--------
G
---------
S
S
G
F
---
T
-----
I
-----
D
N
VMKF
S
V
S
-
A
L
E
H
R
-
V
Y
E
V
R
E
--
T
A
---
V
R
I
I
L
--
D
M
Y
R
----
Q
H
Q
32
Fugue
50.93
13%
28
- C8 -
-
1TCR
1
TVA1_MOUSE
A:
[113-202]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
-
Q
N
P
E
--
P
A
V
-
Y
A
-
L
K
DPRSQD
S
T
L
C
L
F
T
D
F
D
S
---
Q
I
NVPKTMES
G
T
F
I
--
T
D
A
T
V
L
D
M
---
K
-----
A
-----
M
D
----
S
K
S
-
N
G
A
I
A
W
S
N
Q
T
S
F
--
T
C
---
Q
D
I
F
K
--
E
-
T
N
----
A
T
Y
47
Fugue
50.04
14%
-
- C10 -
0.05
5COS
-
?
A:
[10-65]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
-
G
E
V
A
--
E
Q
A
-
M
H
-
W
H
------
L
E
L
------------
Q
--------
E
P
A
V
--
S
A
A
T
L
A
A
C
---
M
-----
S
-----
W
R
----
Q
-
A
-
H
P
L
H
E
H
A
W
Q
R
T
Q
--
V
F
---
A
Q
R
L
R
--
E
-
M
R
-------
37
Fugue
49.27
16%
-
- C10 -
3VFZ
-
RPSD_MYCTU
A:
[146-207]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
-
S
V
T
R
M-
N
E
L
-----------------
L
E
I
L
P
A
---
K
Q
--------
R
E
I
L
--
I
L
R
V
V
V
G
L
---
S
-----
A
-----
E
E
----
T
A
A
-
A
V
G
S
T
-
T
G
A
V
R
V
--
A
Q
---
H
R
A
L
Q
--
R
-
L
K
----
D
E
I
43
Fugue
48.26
21%
-94
- C7 -
-
3ERR
1
DYHC1_MOUSE (first)
A:
[3-529]
DLKRLRQEPEVFHRAIREKGVALDLEALLAVDEQLHKQQEVIADKQMSVKEDLDKVEPAVIEAQNAVKSIKKQHLVEVRSMANPPAAVKLALESIALLLGESTTDWKQIRSIIMRENFIPTIVNFSAEEISDAIREKMKKNYMSNPSYNYEIVNRASLAAGPMVKWAIAQLNYADMLKRVEPLRNELQKLEDDAKDNQQKLEALLLQVPLPPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWEPRISQVSGSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRD
Q
-
V
W
A
I
--
A
E
T
-
D
L
-
Y
L
------
T
G
T
A
E
V
V
L
N
A
L
---
H
S
--------
G
E
I
L
--
P
Y
E
A
L
P
------------------------
L
R
-
Y
A
G
Y
A
P
A
F
R
S
E
A
--
G
-----
S
F
G
K
--
D
-
V
R
----
G
L
M
7
HHSearch
47.85
12%
-6
- C- -
-
3D33
-
?
A:
[74-130]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
D
M
T
I
R
I
T
D
M
---
A
K
--------
G
G
V
V
--
Y
E
N
D
I
P
E
V
QSA
Y
I----
T
-----
I
S
----
I
A
N
-
F
P
A
E
E
Y
K
L
E
I
T
G
T-
P
S
---
G
H
L
T
G
--
Y
----------
12
HHSearch
47.44
14%
-42
- C10 -
0.12
2G1D
-
RS24_THEAC
A:
[31-72]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
-
S
R
-
E
E
------
I
K
E
L
I
A
K
H
E
G
V
---
D
K
--------
E
L
V
I
--
V
D
N
N
K
Q
L
T
---
G
-----
K
-----
H
E
----
I
E
G
-
Y
-
T
K
I
Y
-------------------------------
30
SP3
47.42
18%
-18
- C10 -
0.26
1XJH
-
A:
[1-62]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
D
-
V
E
F
K
--
C
T
C
-
S
R
-
E
R
------
C
A
D
A
L
K
T
L
P
D
E
---
E
V
--------
D
S
I
L
--
A
E
D
--------
G
-----
E
-----
I
D
----
M
H
C
D
Y
C
G
N
H
Y
L
F
N
A
M
---
D
I
---
A
E
I
R
N
--
N
-
A
S
-------
18
HHSearch
46.95
16%
-127
- C10 -
0.20
3U60
-
DPA62_BPT4
A:
[60-102]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
-
F
M
------
V
E
N
A
L
S
Q
F
P
E
C
---
M
P
--------
A
V
Y
A
--
M
N
L
I
G
S
G
L
---
S
-----
D
-----
E
A
----
H
F
N
-
Y
L
M
A
A
V
P
------------------------------