@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : new_query: (2019-03-29 )
RMCILALAEKNQNPEKPSFLEDTFQEIEAPAAAMLSYGGHEIHFELDKNCWPRLRHGSAVPSGYSAHVY
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........----.10-........---.----20.----.-......30....-...-.40----...--------------..-...--50.--.-......----.60..-..-.....----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMCILALA----EK--NQNPEKPS---F----LED----T-FQEIEAPAAAML-SYG-GHE----IHF--------------EL-DKN--C-W--P-RLRHGS----AV-PS-GY-SAHVY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
64.03
28%
-18
- C7 -
0.25
3NVT
-
?
A:
[250-321]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
P
I
---
L
----
L
K
R
G
LSA
T
-
I
E
E
F
I
G
A
A
E
Y
I
M
-
S
Q
G
-
N
G
K
----
I
I
L
C
E
R
G
IRTYEKATRN
T
L
-
D
I
S
--
A
-
V
--
P
-
I
L
K
K
E
T
----
H
L
-
P
V
-
M
V
D
V
T
H
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
SP3
61.55
11%
37
* C7 *
0.43
1FVQ
-
ATU2_YEAST
A:
[1-72]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
R
E
V
I
L
A
V
-----
H
G
--
M
T
C
S
A
C
T
N
---
T
----
I
N
T
----
Q
-
L
R
A
L
K
G
V
T
K
C
D
I
-
S
L
V
-
T
N
E
----
C
Q
V
--------------
T
Y
-
D
N
E
--
V
T
A
--
D
-
S
I
K
E
------
I
I
E
D
C
-
G
F
-
D
C
E
I
L
RDS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
SP3
57.87
13%
16
- C7 -
-
1AW0
-
?
?:
[1-72]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L
T
Q
E
T
V
I
N
I
-----
D
G
--
M
T
C
N
S
C
V
Q
---
S
----
I
E
G
----
V
-
I
S
K
K
P
G
V
K
S
I
R
V
-
S
L
A
-
N
S
N
----
G
T
V
--------------
E
Y
-
D
P
L
--
L
-
T
S
P
E
-
T
L
R
--
G
----
A
I
E
D
M
-
G
F
-
D
A
T
L
S
D---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
56.40
24%
68
- C8 -
-
2MYW
-
?
A:
[7-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
V
Y
Y
D
G
----
H
L
--
P
A
T
R
--------------
V
----
L
-
L
M
Y
V
R
I
G
T
T
A
T
I
-
T
A
R
-
G
H
E
----
F
E
V
--------------
E
A
K
D
Q
N
--
C
-
K
--
V
-
I
L
T
N
G
K
----
Q
A
-
P
D
-
W
L
-
A
A
E
P
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
SP3
56.08
15%
25
- C7 -
-
1AFJ
-
?
?:
[1-72]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
T
Q
T
V
T
L
A
V
-----
P
G
--
M
T
C
A
A
C
P
I
---
T
----
V
K
K
----
A
-
L
S
K
V
E
G
V
S
K
V
D
V
-
G
F
E
-
K
R
E
----
A
V
V
--------------
T
F
-
D
D
T
KA
S
-
V
--
Q
-
K
L
T
K
------
A
T
A
D
A
-
G
Y
-
P
S
S
V
K
Q---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
SP3
54.53
8%
38
- C7 -
0.38
1MWY
-
ZNTA_ECOLI
A:
[2-74]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
G
T
R
Y
S
W
K
V
-----
S
G
--
M
D
C
A
A
C
A
R
---
K
----
V
E
N
----
A
-
V
R
Q
L
A
G
V
N
Q
V
Q
V
-
L
F
A
-
T
E
K
----
L
V
V
--------------
D
A
-
D
N
D
--
I
-
R
--
A
-
Q
V
E
S
------
A
L
Q
K
A
-
G
Y
-
S
L
R
D
E
QAAE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
Fugue
52.71
26%
41
- C7 -
0.37
5ERX
-
MEND_MYCTU
A:
[22-574]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
P
S
T
T
Q
A
R
V
V
V
D
E
L
I
R
G
GVR
D
V
V
L
C
P
G
SRNAPL
A
F
A
L
Q
D
A
D
R
S
GR
I
R
L
H
V
R
ID
E
R
T
A
G
Y
L
A
I
G
L
A
I
G
A
G
A
P
V
C
V
A
M
T
SGT
A
V
A
N
L
G
P
A
V
V
E
A
N
Y
A
RVP
L
I
V
L
S
A
NYFGTQVR
A
S
I
S
L
G
L
A
----
E
D
--
A
--
P
E
R
T
S
---
A
----
L
N
A
----
T
-
W
R
S
A
T
C
R
V
L
A
A
A
-
T
G
A
-
R
T
A
N
A
G
P
V
H
F
--------------
D
I
-
P
L
T
-------
P
-
P
G
R
P
A
G
----
K
--
P
W
-
T
Y
-
T
P
P
V
T
F
D
Q
P
L
D
I
D
LSVD
T
V
V
I
S
G
HG
A
G
V
H
PNLAALPTVAEPTAPRSGDNPLHPLALPLLRPQ
Q
V
I
M
L
G
RPTLH
R
P
V
S
V
L
L
A
DAE
V
P
V
F
A
L
T
TGPRWPDVSGNSQATGTRAVTTGAPR
P
A
W
L
D
R
C
A
A
M
N
R
H
A
I
A
A
V
R
E
Q
L
A
A
HP
L
T
T
G
L
H
V
A
A
A
V
S
H
A
LRPG
D
Q
L
V
L
G
ASN
P
V
R
D
V
A
L
A
GLDTRGIRVRSNRGVAGIDG
T
V
S
T
A
I
G
A
A
L
A
Y
E
G
A
H
E
R
T
GSPDS
P
P
R
T
I
A
L
I
G
D
L
T
F
V
H
D
SSGLLIGPT
E
P
I
P
R
S
L
T
I
V
V
SNDNGGGDVSS
R
I
F
G
T
PHDVD
V
G
A
L
C
R
A
Y
H
V
E
S
R
Q
I
E
VDE
L
G
P
T
L
D
QPGAG
M
R
V
L
E
V
K
A
D
RSS
L
R
Q
L
H
A
A
I
K
A
A
L
34
Fugue
50.98
21%
61
- C6 -
-
3H9V
2
?
A:
[7-336]
---------------------------------------------------------------------------------------------------------------------------------------------------------G
T
L
N
R
F
T
Q
A
L
V
I
A
Y
V
I
GYVFVYNKGY
Q
D
T
D
T
V
L
S
S
V
T
T
K
V
K
G
I
A
L
T
KTSEL
G
E
R
I
W
DVADYIIPPQEDG
S
F
F
V
L
T
N
M
I
I
T
T
NQTQ
S
K
C
A
E
N
PTPASTCTSHRDCKG
F
N
D
A
R
G
DGVRTG
R
C
V
S
YSAS
V
K
T
C
E
V
L
S
WCPLEKIVDPPNPPLLADAER
F
T
V
L
I
K
N
N
I
R
YPKFN
F
N
K
R
NILPNINSSYL
T
H
C
V
F
-------
S
R
--
K
T
D
P
D
C
P
I
---
F
R---
L
G
D
----
I
-
V
G
E
A
E
E
D
F
Q
I
M
A
-
V
R
G
-
G
-
V
----
M
G
V
--------------
Q
I
-
R
W
D
--
C
-
D
--
L
-
D
M
P
Q
S
W
----
C
V
-
P
R
-
Y
T
-
F
R
R
L
D
NKDPDNNVAP
G
Y
N
F
R
F
A
K
Y
Y
KNSDG
T
E
T
R
T
L
I
K
G
Y
G
I
R
F
D
V
M
V
F
G
Q
A
G
K
F
N
I
I
P
T
L
L
N
I
G
A
G
L
A
L
L
G
L
V
N
V
I
C
D
W
I
V
L----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
48.95
14%
-179
- C7 -
0.32
1QU1
-
?
A:
[34-175]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QAAD
L
K
S
T
Q
A
A
I
D
Q
I
N
G
K
L
N
R
V
I
E
K
T
N
E
K
F
H
Q
I
E
K
E
F
S
E
V
E
G
R
I
Q
D
L
E
K
Y
V
E
D
T
K
I
D
L
W
S
Y
N
A
E
L
L
----
V
A
--
L
E
N
Q
H
T
I
D
---
L
----
T
D
S
----
E
-
M
N
K
L
F
E
K
T
R
R
Q
L
---
G
-
S
F
K
----
I
Y
H
--------------
K
C
-
D
N
A
--
C
-
I
--
E
-
S
I
R
N
G
T
----
Y
D
-
H
D
-
V
Y
-
R
D
E
A
L
N
N
R
F
Q
I
KG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
SP3
44.47
13%
92
- C7 -
0.49
1CPZ
-
COPZ_ENTHA
A:
[1-68]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
----
Q
E
F
S
V
K
G
M
S
C
N
H
C
V
A
R
----
I
E
E
----
A
-
V
G
R
I
S
G
V
K
K
V
K
V
-
Q
L
K
-
K
E
K
----
A
V
V
--------------
K
F
-
D
E
A
--
N
-
V
Q
A
T
-
E
I
C
Q
------
A
I
-
N
E
L
G
Y
-
Q
A
E
V
I
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
41.39
18%
-341
- C7 -
0.03
5OAR
6
?
D:
[216-252]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
N
K
T
Y
E
---
V
----
V
G
N
----
V
-
Y
K
E
L
S
D
----
I
---
F
P
-
D
H
W
----
F
H
V
GGD-----------
E
I
-
Q
P
N
--
C
-
F
--
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
39.87
17%
-41
- C9 -
-
3H43
-
PAN_METJA
F:
[80-135]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
----
R
E
--
L
D
R
M
R
V
P
P
---
L
----
I
V
G
----
T
-
V
V
D
K
V
G
E
R
K
V
V
V
K
S
S
T
-
G
P
S
----
F
L
V
--------------
N
V
-
S
H
F
--
V
-
N
--
P
D
D
L
A
P
G
K
----
R
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
HHSearch
39.02
17%
-50
* C9 *
-
3H43
-
PAN_METJA
I:
[80-135]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
----
R
E
--
L
D
R
M
R
V
P
P
---
L
----
I
V
G
----
T
-
V
V
D
K
V
G
E
R
K
V
V
V
K
S
S
T
-
G
P
S
----
F
L
V
--------------
N
V
-
S
H
F
--
V
-
N
--
P
D
D
L
A
P
G
K
----
R
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
38.60
18%
23
- C7 -
0.29
4UM2
1
EST1A_HUMAN
A:
[1-582]
S
M
E
L
H
R
L
L
R
V
A
D
N
Q
E
L
Q
L
S
N
L
L
S
RDRIS
P
E
G
L
E
K
M
A
Q
L
R
A
E
L
L
Q
L
Y
E
R
C
I
L
L
D
I
E
F
S
D
N
Q
N
V
D
Q
I
L
W
K
N
AF
Y
Q
V
I
E
K
F
R
Q
L
V
K
DPNVEN
P
E
Q
I
R
N
R
L
L
E
L
L
D
E
G
S
D
F
F
D
S
L
L
Q
K
L
Q
V
T
Y
KFKLEDYMDGLAIRLR
K
T
V
K
Y
A
L
I
S
A
Q
R
C
M
I
C
Q
G
D
I
A
R
Y
R
E
Q
A
S
DTANY
G
K
A
R
S
W
Y
L
K
A
Q
H
I
APKNG
R
P
Y
N
Q
L
A
L
L
A
V
Y
T
RR
K
L
D
A
V
Y
Y
Y
M
R
S
L
A
ASNPI
L
T
A
K
E
S
L
M
S
L
F
E
E
T
K
R
K
A
E
Q
M
EKGLGSLS
P
S
D
L
N
K
R
F
I
L
S
F
L
H
A
H
G
K
L
F
TRIGMET
F
P
A
V
A
E
K
V
L
K
E
F
Q
V
L
L
Q
HSPSPIG
S
T
R
M
L
Q
L
M
T
I
N
M
F
A
V
H
N
SQRS
V
I
Q
E
Q
A
A
A
L
G
L
A
M
F
S
L
L
V
R
R
C
T
C
L
L
K
----
E
S
--
L
S
S
P
E
D
Q
D
---
D
----
Q
D
D
----
I
K
V
S
S
F
V
P
D
L
K
E
L
L
-
P
S
V
-
K
V
W
----
S
D
W
--------------
M
L
G
Y
P
D
--
T
-
W
--
N
-
P
P
P
T
S
L
----
D
L
-
P
S
-
H
V
-
A
V
D
V
W
S
T
L
A
D
F
C
N
I
L
T
A
VNQSE
V
P
L
Y
KDPDDD
L
T
L
L
I
L
E
E
D
R
L
L
SGFVPLLAAPQ
D
P
C
Y
V
E
KTSD
K
V
I
A
A
D
C
K
R
V
T
V
L
K
Y
F
L
E
A
L
C
G
QEEPLLAFKGG
K
Y
V
S
VAPV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
SP3
38.04
15%
53
- C8 -
-
1EAR
-
UREE_SPOPA
A:
[1-74]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
I
T
K
I
V
----
G
H
--
I
D
D
L
S
H
Q
I
---
K
KVDW
L
E
V
----
E
-
W
E
D
L
N
K
R
I
L
R
K
E
-
T
E
N
-
G
T
D
----
I
A
I
--------------
K
L
-
E
N
S
-------
G
-
T
L
R
Y
G
D
----
V
L
Y
E
S
-
D
D
-
T
L
I
A
I
R
T
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43
SP3
37.32
10%
-49
- C7 -
0.30
1S0Y
1
?
A:
[2-63]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
M
I
S
C
D
M
R
----
Y
G
--
R
T
D
E
Q
K
R
A
---
L
----
S
A
G
----
L
-
L
R
V
I
S
E
A
T
G
E
P
R
-
E
-
N
-
I
F
F
----
V
I
R
--------------
E
G
-
S
G
I
--
N
-
F
-----
V
E
H
G
E
----
H
L
-
P
D
-
Y
V
-
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
35.53
17%
60
- C8 -
-
1V5O
-
DDI1_MOUSE
A:
[1-102]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
S
S
G
S
S
G
M
L
I
T
V
Y
C
V
RRDL
T
E
V
T
F
S
L
Q
V
N
PDFE
L
S
N
F
R
V
L
C
E
----
L
E
--
S
G
V
P
A
E
E
A
---
Q
----
I
V
Y
----
M
-
E
Q
L
L
T
D
D
H
C
S
L
G
-
S
Y
G
L
K
D
G
----
D
M
V
--------------
V
L
-
L
Q
K
--
D
-
N
--
V
-
G
L
R
T
P
G
----
R
T
-
P
S
-
G
P
-
S
S
G
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46
SP3
35.05
11%
44
* C8 *
-
1M94
-
HUB1_YEAST
A:
[1-73]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
E
V
V
V
N
D
RL
G
K
K
--
V
R
V
K
C
L
A
E
----------
D
----
S
-
V
G
D
F
K
K
V
L
S
L
Q
I
-
G
T
Q
-
P
N
K
----
I
V
L
--------------
Q
K
-
G
G
S
--
V
-
L
--
K
---
D
H
I
S
LEDY
E
V
-
H
D
-
Q
T
-
N
L
E
L
Y
Y
L--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
35.02
17%
-71
- C9 -
-
2WG5
-
GCN4_YEAST (first)
C:
[58-106]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
S
P
P
---
L
----
L
V
G
----
V
-
V
S
D
I
L
E
D
G
R
V
V
V
K
S
S
T
-
G
P
K
----
F
V
V
--------------
N
T
-
S
Q
Y
--
I
N
E
--
E
-
E
L
K
P
G
A
----
R
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
34.87
18%
-247
- C7 -
0.14
5OAR
2
?
B:
[216-252]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
N
K
T
Y
E
---
V
----
V
G
N
----
V
-
Y
K
E
L
S
D
----
I
---
F
P
-
D
H
W
----
F
H
V
GGD-----------
E
I
-
Q
P
N
--
C
-
F
--
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------