@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0013_070800T0_kcl48: (2019-03-29 )
RECHVTVWEGNTHRGTEMLKEGGDAKEIAGYTCRAGAGCKAECDGMDPPFR
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......-..--.10-........20..-...-----...--30...-.-....40.-....-----.--------..50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R
E
C
H
V
T
-
V
W--EGN-TH
R
G
T
E
M
L
K
EGG-
D
A
K
-----
E
I
A--
G
Y
T
CR-A-GAGCKAE-CDGM-----D--------PPFR
29
Fugue
65.06
25%
63
* C18 *
-
4Q98
-
FIMA_PORGI
A:
[9-365]
-------------------------------------------------------------------------------------------------------------------------------------------------------------VVETNATVSFIIKSGESRAVGDDLTDAK
I
T
K
L
T
A
M
V
Y
--
A
G
Q
-
V
Q
E
G
I
K
T
V
E
E
D
G
-
G
V
L
-----
K
V
E
--
G
I
P
C
K
-
S
-
G
A
N
--------------------------
R
40
Fugue
59.16
29%
-21
- C15 -
0.16
5MG8
2
SMC6_SCHPO
B:
[23-286]
SQIEKRANESNNLQREIADLSEQIVELESKRNDLHSALLEMGGNLTSLLTKKDSIANKISDQSEHLKVLEDVQRDKVSAFGKNMPQLLKLITRETRFQHPPKGPMGKYMTVKEQKWHLIIERILGNVINGFIVRSHHDQLILKELMRQSNCHATVVVGKYDPFDYSSGEPDSQYPTVLKIIKFDD
D
E
V
L
H
T
-
L
I
--
N
----
H
L
G
I
E
K
M
L
L
I
E
-
D
R
R
-----
E
A
E
--
A
Y
M
K
R
-
G
-
I
A
N
V
T
-
Q
-
C
Y
A
L
-----
D
--------
P
R
N
R
35
Fugue
56.38
25%
18
- C15 -
0.44
5DBJ
1
?
D:
[5-441]
--------------------------------------------------------------------------------------------------------------------------------------------------SDHDYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFE
R
E
---
H
-
V
G
--
E
S
L
-
V
P
A
T
T
P
V
L
L
E
I
G
-
V
M
E
-----
K
I
E
KA
N
F
P
K
K
-
F
-
G
A
A
W
T
S
A
-
D
S
G
P
-----
E
--------
D
K
M
G
48
SP3
53.72
23%
-109
* C16 *
-
1JL9
-
EGF_HUMAN
A:
[6-47]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
P
L
S
-
H
D
--
G
Y
C
-
L
H
D
G
V
C
M
Y
I
E
A
L
-
D
K
------------
Y
A
C
N
-
C
-
V
V
G
Y
I
G
E
R
C
Q
Y
R
-----
D
--------
L
---
4
PsiBlast_PDB
52.29
40%
-136
- C20 -
-
2AXE
-
AXE2_TALPU
A:
[152-174]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
-
F
D
Q
-----
R
P
A
--
G
F
S
C
P
-
S
-
A
A
K
I
K
S
Y
-
C
D
A
S
-----
D
--------
P
---
38
Fugue
52.23
19%
-50
- C15 -
0.15
5HY7
-
?
C:
[27-81]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-
S
W
--
E
W
K
-
T
N
I
H
R
D
T
Y
S
S
I
V
-
G
H
P
-----
P
L
L
--
S
Y
M
A
L
-
A
Q
N
E
P
V
A
K
F
-
R
V
Q
M
-----
I
RKMLQPVG
P
P
P
P
46
SP3
51.31
21%
47
- C13 -
-
1KBE
-
A:
[1-49]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
V
T
H
R
F
S
T
K
S
W
L
S
Q
-
V
C
N
VCQKS
M
I
F
--
G
V
K
C
K
H
C
-
R
L
K
C
H
N
K
-
C
T
K
E
-----
A
--------
P
A
C
R
13
HHSearch
50.50
28%
-24
- C15 -
0.22
6GCS
-
?
C:
[111-146]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
D
-
P
H
--
V
G
L
-
L
H
R
G
T
E
K
L
I
E
Y
K
-
T
Y
M
-----
Q
A
L
--
P
Y
F
D
R
-
L
-
D
Y
V
S
--------------------------
25
HHSearch
48.26
24%
0
- C- -
-
4HEA
-
NQO4_THET8
E:
[56-89]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
P
H
--
I
G
Y
-
L
H
T
G
F
E
K
T
M
E
H
R
-
T
Y
L
-----
Q
N
I
--
T
Y
T
P
R
-
M
-
D
Y
L
H
--------------------------
24
HHSearch
48.26
24%
0
- C- -
-
3IAM
-
D:
[56--289]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-
P
H
--
I
G
Y
-
L
H
T
G
F
E
K
T
M
E
H
R
-
T
Y
L
-----
Q
N
I
--
T
Y
T
P
R
-
M
-
D
Y
L
H
--------------------------
2
PsiBlast_PDB
47.98
40%
-14
* C20 *
-
1BS9
-
AXE2_TALPU
A:
[150-176]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
-
F
D
Q
-----
R
P
A
--
G
F
S
C
P
-
S
-
A
A
K
I
K
S
Y
-
C
D
A
S
-----
D
--------
P
---
3
PsiBlast_PDB
47.91
40%
-11
- C20 -
-
1G66
2
AXE2_TALPU
A:
[150-176]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
-
F
D
Q
-----
R
P
A
--
G
F
S
C
P
-
S
-
A
A
K
I
K
S
Y
-
C
D
A
S
-----
D
--------
P
---
22
HHSearch
47.64
30%
-14
- C15 -
0.25
5LC5
-
NDUS2_BOVIN
D:
[76-108]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
D
-
P
H
--
I
G
L
-
L
H
R
G
T
E
K
L
I
E
Y
K
-
T
Y
L
-----
Q
A
L
--
P
Y
F
D
R
-
L
-
D
Y
----------------------------
47
SP3
46.85
17%
3
- C16 -
-
1D4V
-
TR10B_HUMAN
A:
[69-114]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P
Q
Q
K
R
S
S
-
P
S
--
E
G
L
-
C
P
P
G
H
H
I
S
E
D
G
R
-
D
C
------------
I
S
C
K
-
Y
-
G
Q
D
Y
S
T
H
-
W
N
-------
D
--------
L
L
F
C
32
Fugue
46.34
17%
-17
- C15 -
0.10
2LZR
-
TATA_ECOLI
A:
[2-49]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
G
I
S
-
I
W
--
Q
L
L
-
I
I
A
V
I
V
V
L
L
F
G
---
P
K
-----
K
L
G
--
S
I
G
S
D
-
L
-
G
A
S
I
K
G
F
-
K
K
A
M
-----
S
--------
D
D
E
P
36
Fugue
44.29
15%
-3
- C16 -
-
5V0S
-
?
A:
[1-69]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
D
L
Y
V
D
-
V
L
DK
V
G
A
-
L
A
H
V
T
S
I
L
A
R
E
E
I
S
I
T
-----
N
L
Q
--
I
L
E
A
R
-
E
-
G
L
L
G
V
L
R
-
I
S
F
Q
-----
R
--------
E
E
D
R
23
HHSearch
43.48
29%
-125
* C17 *
-
4IT7
-
?
B:
[88-111]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
C
T
V
A
-
I
W
--
E
K
P
-----------
W
E
-
N
F
E
-----
E
I
T
--
I
K
E
C
K
-
S
-------------------------------
30
Fugue
43.27
16%
-60
- C15 -
0.16
1HD6
-
MER22_EUPRA
A:
[1-37]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
C
D
I
A
-
I
A
--
Q
C
S
-
L
T
L
C
Q
D
-----------------------
C
E
-
N
-
T
P
I
C
E
L
A
-
V
K
G
S
C----
P
--------
P
P
W
S
1
PsiBlast_PDB
43.18
38%
-73
- C15 -
0.08
6GNG
-
?
A:
[510-542]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
G
T
K
I
I
E
E
G
C
-
K
-
E
-----
A
L
A
--
G
Y
G
S
K
-
A
-
F
A
G
M
R
A
A
-
C
M
K
Q
-----
D
------------
44
SP3
42.04
23%
54
- C14 -
-
1DL0
-
TK1C_HADVE
A:
[1-37]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
I
C
T
G
A
-
D
R
P
-----
C
A
A
--
C
C
P
C
C
-
P
-
G
T
S
C
K
A
E
-
S
N
G
V
SYCRK
D
--------
E
P
--