@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0088_065270T0_kcl23: (2019-03-29 )
SPGTLAEDADSPARPCKVTISMAVSPGGYFRQIYGEGLTTRGGRVAIENFKCTVDETCNNPSCPDVPPTWQVTSYD
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...-----.-.----------....10-...--.....-----------20--.----.......---.30-...-.-------.....40---.--.....--.--.--.50.----.-.....---.60..--------....-------..70.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPG-----T-L----------AEDADS-PAR--
P
C
K
V
T
-----------
I
---
S
----
M
A
VSPG
G
---
Y
F
--
R
Q
I
-
Y
-------GEGLTT----R--G
G
R
V
A
--
I
--
E
--
N
F
K
C
----T-VDETC---NNPSC--------PDVP-------PT
W
Q
VTSYD
30
Fugue
68.20
20%
21
- C9 -
0.44
5A6W
4
?
C:
[11-93]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDL
S
R
E
-----
R
-
D
----------
P
N
F
F
D
H
-
P
G
I
--
P
V
P
E
C
-----------
F
---
W
----
F
M
F
K
--
N
---
N
V
--
R
Q
D
-
A
-------
G
T
C
Y
S
S
----
W
--
K
M
D
M
K
--
V
GP
N
--
W
V
H
I
----
K
-
S
D
D
N
C
---
N
--
L
S
--------
G
D
F
P
-------
P
G
W
I
V
L
G
K
K
31
Fugue
65.19
23%
10
- C9 -
0.35
2MYW
-
?
A:
[7-85]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGR
E
N
L
-----
Y
-
F
----------
Q
G
H
M
A
A
-
P
A
R
--
F
C
V
Y
Y
DGH--------
L
---
P
----
A
T
R
V
L
L
M
---
Y
V
--
R
I
G
-
T
-------
T
A
T
I
T
A
----
R
--
G
H
E
F
E
--
V
--
E
AK
D
Q
N
C
----
K
-
V
I
L
T
----
N
G
K
Q
A
--------
P
D
----------
W
L
A
A
E
P
Y
-
1
PsiBlast_PDB
63.94
26%
-112
- C9 -
0.13
3OR1
2
?
B:
[214-272]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
H
E
N
-
L
A
E
--
L
C
E
I
P
-----------
L
---
A
----
V
A
A
C
P
T
A
---
A
V
--
K
P
I
-
T
-------
A
E
V
N
G
Q
----
K
--
V
K
S
V
A
--
I
--
N
--
N
D
R
C
----
M
-
Y
C
G
N
C
---
Y
T
-
M
C
--------
P
A
L
P
----------------
2
PsiBlast_PDB
63.88
26%
-101
- C9 -
0.17
3OR2
1
?
B:
[213-271]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
H
E
N
-
L
A
E
--
L
C
E
I
P
-----------
L
---
A
----
V
A
A
C
P
T
A
---
A
V
--
K
P
I
-
T
-------
A
E
V
N
G
Q
----
K
--
V
K
S
V
A
--
I
--
N
--
N
D
R
C
----
M
-
Y
C
G
N
C
---
Y
T
-
M
C
--------
P
A
L
P
----------------
33
Fugue
62.23
20%
5
* C11 *
-
4XGC
-
?
C:
[1-676]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQPFYEEYRKAWNQINDHIADLQHRSYARTLEQLVDFVVGQAERDEVLPTAALLTGINQPDHLSQFTALTQRLHAQRAAMVCVLQSRDCATLKAAVETLVFGLVEDNAEVEQLRRSQCTMKQLKSWYTNNFDSEQKRRQLVVILPDFECFNASVLQDLILILSAHCGSLPFVLVLGVATAMTAVHGTLPYHVSSKIRLRVFQTQAAPTGLNEVLDKVLLSPKYAFHLSGKTFKFLTHIFLYYDFSIHGFIQGFKYCLMEHFFGGNAFALCTDYSKALGRIKQLTHEDMETIRRLPSFRPYVEQINDCKRIIAVLTDDDYLKKKLPQLLRDCLLHFLLFRCSLEFLTELVGDLPRCPLGKLRRELYVNCLNRAIISTPEYKECLQMLSFLSKDEFVAKVNRALERTEQFLVEEI
A
P
L
-----
E
-
L
----------
G
E
A
C
T
A
-
V
L
R
--
P
K
L
E
A
-----------
I
---
R
----
L
A
V
D
E
V
G
-----------------------------
R
--
A
L
Q
K
T
--
L
--
Q
--
L
I
E
T
----
Q
-
I
V
Q
D
H
---
L
R
A
L
---------
Q
D
A
P
-------
P
I
H
E
L
F
V
F
S
29
Fugue
61.61
26%
45
- C9 -
-
1BI1
-
?
?:
[148-225]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
G
-----
T
-
R
----------
V
I
D
A
-
A
-
T
S
M
--
P
R
K
V
R
-----------
I
---
V
QINE
I
F
Q
V
E
T
D
---
Q
F
--
T
Q
L
-
L
-------
D
A
D
I
R
V
-------
G
S
E
V
E
--
I
--
V
--
D
R
H
I
----
T
-
L
S
H
-----
N
G
K
D
V
ELL-----
D
D
L
A
-------
H
T
I
R
I
E
E
--
24
Fugue
56.30
18%
40
- C9 -
0.19
4EYT
-
?
A:
[10-106]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Q
N
-----
C
-
L
----------
I
K
I
I
N
I
-
P
Q
G
--
T
L
K
A
E
-----------
V
---
V
----
L
A
V
R
H
L
G
YEF
Y
C
--
D
Y
I
-
D
-------
G
Q
A
M
I
R
FQNS
D
--
E
Q
R
L
A
--
I
--
Q
--
K
L
L
N
HNNN
K
-
L
Q
I
E
I
---
R
G
Q
I
C
DVISTIPE
D
E
E
K
-------
N
Y
W
N
Y
I
K
F
K
42
SP3
55.56
15%
5
- C13 -
-
1USH
-
?
?:
[26-550]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCM
A
A
E
-----
N
-
K
----------
K
Q
V
D
Y
V
-
P
G
T
--
P
C
K
P
D
-----------
Q
QNG
I
----
W
I
V
Q
A
H
E
---
W
G
--
K
Y
V
-
G
-------
R
A
D
F
E
F
----
R
--
N
G
E
M
K
--
M
--
V
--
N
Y
Q
L
----
I
P
V
N
L
K
K
---
R
V
L
Y
T
--------
P
E
I
A
-------
E
N
Q
Q
M
I
S
L
L
25
Fugue
50.03
24%
32
- C11 -
-
3FC7
-
?
A:
[142-241]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDSPDGIVHLT
T
N
G
-----
T
-
I
----------
L
S
V
N
P
S
M
A
G
R
--
L
G
A
D
P
-----------
D
---
T
----
L
---
V
G
Q
---
Q
L
--
S
A
V
M
D
-------
S
E
A
A
N
Q
----
R
LE
A
G
K
S
A
--
V
--
E
--
N
G
T
A
----
T
-
R
S
E
D
A
VGG
R
H
Y
H
N
--------
Q
Y
I
P
VDSHRKS
D
T
F
Q
L
V
S
R
D
44
SP3
49.20
13%
14
- C16 -
-
1HM9
2
GLMU_STRPN
A:
[11-468]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHM
V
N
G
-----
V
-
S
----------
F
V
N
P
E
A
-
T
Y
I
--
D
I
D
V
E
-----------
I
---
A
----
P
E
V
Q
I
E
A
--------
N
V
-
I
-------
L
K
G
Q
T
K
----
I
--
G
A
E
T
V
--
L
--
T
--
N
-
G
T
----
Y
-
V
V
D
S
T
---
I
G
A
G
A
----------
V
I
-------
T
N
S
M
I
E
E
S
S
38
Fugue
49.01
18%
37
- C7 -
-
5E7G
12
Y2650_BACO1
A:
[1-456]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAIPVIHYIRVTDVNPGTMIVVVGEHLGGTQKVYINDQEVSFNRNYVTSTSIILTVPNELELTGQ
N
P
E
-----
L
-
K
----------
G
E
I
R
I
E
-
T
E
H
--
G
V
A
A
Y
-----------
N
---
M
----
H
V
L
S
P
A
P
---
Y
I
--
T
R
I
-
S
ATYPIKP
G
D
Q
M
T
V
----
I
--
G
G
N
F
Y
--
E
--
V
--
Q
A
V
Y
----
L
-
S
T
E
Q
P
---
A
K
D
G
T
--------
R
P
V
D
--------
V
Q
E
I
T
N
Y
E
37
Fugue
47.90
19%
71
* C9 *
0.01
2N5D
-
?
A:
[1-84]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
G
-----
S
-
Y
TGAGEPSQAD
L
D
A
L
L
S
-
A
V
R
--
D
N
R
L
S
-----------
I
---
E
----
Q
A
V
T
L
L
T
---
P
---
R
R
G
-
G
-------
G
S
G
G
G
S
----
M
--
D
A
K
E
I
--
L
--
T
--
R
F
K
--------
D
G
G
L
---
D
R
A
A
A
--------
Q
A
L
L
AG-----
R
T
P
A
A
A
P
R
P
41
SP3
45.98
14%
54
- C12 -
-
1V5M
-
A:
[1-136]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGNLAAKVELVDIQREGALRFM
V
A
D
-----
D
-
A
----------
A
S
G
P
G
G
-
T
A
Q
WQ
K
C
R
L
L
-----------
L
---
R
----
R
A
V
A
G
E
R
---
F
R
--
L
E
F
-
F
-------
V
P
P
K
A
S
----
R
---
P
K
V
S
--
I
--
P
--
L
S
A
I
----
I
-
E
V
R
T
T
---
M
P
L
E
M
--------
P
E
K
D
-------
N
T
F
V
L
K
V
E
N
35
Fugue
44.61
16%
-32
- C8 -
-
4UIR
2
OLHYD_ELIME
A:
[2-646]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPITSKFDKVLNASSEYGHVNHEPDSSKEQQRNTPQKSMPFSDQIGNYQRNKGIPVQSYDNSKIYIIGSGIAGMS
A
A
Y
-----
Y
-
F
----------
I
R
D
G
H
V
-
P
A
K
--
N
I
T
F
L
-----------
E
---
Q
----
L
H
I
D
-
G
G
---
S
L
DG
A
G
N
-
P
-------
T
D
G
Y
I
I
----
R
--
G
G
R
E
M
--
D
--
M
--
T
Y
E
-----
N
-
L
W
D
M
F
---
Q
D
I
P
A
--------
L
E
M
P
-------
A
P
Y
S
V
L
D
E
Y
43
SP3
43.40
18%
48
* C16 *
-
1LXA
-
?
?:
[1-262]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIDKSAFV
H
P
T
-----
A
I
V
----------
E
E
G
A
S
I
-
G
A
N
-----
A
H
-----------
I
---
G
----
P
F
C
I
V
G
P
---
H
V
--
E
-
I
---------
G
E
G
-
T
V
----
L
--
K
S
H
V
V
--
V
--
N
--
G
-
H
T
----
K
-
I
G
R
D
N
---
E
I
Y
Q
F
--------
A
S
I
G
-------
E
V
N
Q
D
L
K
Y
A
23
HHSearch
41.04
47%
-218
- C4 -
-
3ZJ2
-
A:
[9-23]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
C
----
K
-
F
G
A
L
C
---
S
N
P
S
C
--------
P
F
------------------
34
Fugue
40.35
18%
32
- C11 -
-
1P68
-
?
A:
[1-102]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
Y
G
-----
K
-
L
----------
N
D
L
L
E
D
-
L
Q
E
--
V
L
K
N
L
HKNWHGGKDNL
H
---
D
----
V
D
N
H
L
Q
N
---
V
I
--
E
D
I
-
H
DFMQ---
G
G
G
-------
S
--
G
G
K
L
Q
EM
M
--
K
--
E
F
Q
Q
----
V
-
L
D
E
L
N
---
N
H
L
Q
------------
G
-------
G
K
H
T
V
H
H
I
E
16
HHSearch
40.11
23%
-34
* C10 *
-
4EQQ
-
?
A:
[77-107]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
M
S
P
D
A
---
I
R
--
D
Q
L
-
V
S------
F
D
K
F
T
Q
----
E
--
E
A
D
Y
A
--
V
--
A
--
N
L
K
------------------------------------------------
40
SP3
40.02
14%
48
* C13 *
-
1JZ8
1
BGAL_ECOLI
A:
[13-1023]
RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCQYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDV
A
P
Q
GKQLI
E
-
L
----------
P
E
L
P
-
Q
-
P
E
S
--
A
G
Q
L
W
-----------
L
---
T
----
V
R
V
-----------
V
Q
P
-
N
-------
A
T
A
W
S
E
----
A
--
G
H
I
S
A
--
W
--
Q
--
Q
W
R
L
----
A
-
E
N
L
S
V
---
T
L
P
A
A
--------
S
H
A
I
-------
P
H
L
T
T
S
E
M
D
45
SP3
39.35
10%
45
* C12 *
-
1IH7
1
DPOL_BPR69
A:
[1-903]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYEIKYDHTKIRVANFDIEVT
S
P
D
-----
G
-
F
----------
P
-
E
P
S
Q
-
A
K
H
--
P
-
I
D
A
-----------
I
---
T
----
H
Y
D
S
I
D
D
---
R
F
--
Y
V
F
-
D
-------
L
L
N
S
P
Y
----
G
--
N
V
E
E
W
--
S
--
I
--
E
I
A
A
----
K
-
L
Q
E
Q
G
---
G
D
E
V
P
--------
S
E
I
I
-------
D
K
I
I
Y
M
P
F
D