@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0088_113420T0_kcl1: (2019-03-29 )
EPNPVVYDAPGSSVQECFWFMFYNGQRVDAGACHSDWSFGLQVGKRFVQIKTDKKCNLHGTYAPGWIVLGRER
Atome Classification :
(20 SA)
---------------------------------....-.....10--......--------...20-....------....30....------.-----...----40.......----------.50.-..-....------.---60...---......70..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------EPN
P
-
V
V
Y
DAP---G
S
S
V
Q
E
--------
C
F
W
F
M
-
F
YNG------QRVDAGACHS------
D
-----
W
S
F
----
G
L
Q
V
G
K
R
F
V
----------
Q
I
KT-D
K
-
K
CNL------
H
---
G
-TYA---P
G
W
I
V
L
GRER
8
HHSearch
85.37
53%
-131
- C19 -
0.55
6FU9
-
?
B:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
H
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
4
PsiBlast_PDB
85.37
53%
-131
- C19 -
0.55
6FU9
-
?
B:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
H
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
9
HHSearch
84.92
53%
-135
- C19 -
0.55
6FUB
-
?
B:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
N
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
1
PsiBlast_PDB
84.92
53%
-135
- C19 -
0.55
6FUB
-
?
B:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
N
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
5
PsiBlast_PDB
84.49
53%
-134
- C19 -
0.59
6G10
-
?
C:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
H
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
2
PsiBlast_PDB
84.34
53%
-133
- C19 -
0.58
6G11
-
?
C:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
N
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
3
PsiBlast_PDB
83.28
53%
-132
- C19 -
0.69
5A6W
4
?
C:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
H
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
6
PsiBlast_PDB
81.84
50%
-132
- C19 -
0.64
6FUD
-
?
B:
[18-90]
---------------------------------
E
R
D
P
-
N
F
F
D
N
A
---
D
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
39
Fugue
75.59
53%
79
- C19 -
0.61
5A6W
4
?
C:
[11-93]
--------------------------RAIDLSR
E
R
D
P
-
N
F
F
D
H
P
---
G
I
P
V
P
E
--------
C
F
W
F
M
-
F
K
N
N
------
V
R
Q
D
A
G
T
C
Y
S
------
S
-----
W
K
M
----
D
M
K
V
G
P
N
W
V
----------
H
I
K
S
-
D
D
-
N
C
N
L
------
S
---
G
-
D
F
P
---
P
G
W
I
V
L
G
K
K
R
53
Fugue
40.73
19%
-10
- C16 -
-
5T5I
-
?
G:
[2-81]
-----------------------------AIGL
K
A
Y
P
-
E
L
C
H
G
C
---
G
N
C
V
I
A
--------
C
P
V
N
A
-
L
R
S
P
------
E
V
A
G
G
K
G
P
T
D
------
D
-----
V
E
I
----
I
M
I
V
E
D
G
V
V
----------
N
I
K
N
-
P
D
-
L
C
G
K
------
C
---
G
-
T
C
V
ESC
P
V
D
A
I
R
L
E
E
L
45
Fugue
38.29
23%
24
- C19 -
0.24
4AKA
-
?
A:
[19-124]
GADSCKYCLQLYDETYERGSYIEVYKSVGSLSP
P
W
T
P
-
G
S
V
C
V
P
FVN
D
T
K
R
E
R
--------
P
Y
W
Y
L
-
F
D
N
V
NYTGRI
T
G
L
G
H
G
T
C
I
D
------
D
-----
F
T
K
SGFK
G
I
S
S
I
K
R
C
I
----------
Q
T
K
D
-
G
K
-
V
E
C
I
------
N
---
Q
-----------------
47
Fugue
38.06
23%
34
- C19 -
0.24
1B0G
-
B2MG_HUMAN
B:
[1-100]
--------------MIQRTPKIQVYSRHPAENG
K
S
N
F
-
L
N
C
Y
V
S
---
G
F
H
P
S
D
--------
I
E
V
D
L
-
L
K
N
G
------
E
R
I
E
K
-
V
E
H
S
DLSFSK
D
-----
W
S
F
----
Y
L
L
Y
Y
T
E
F
T
----------
P
T
E
K
-
D
E
Y
A
C
R
V
------
N
HV-
T
-
L
S
Q
---
P
K
I
V
K
W
D
R
D
M
35
SP3
35.84
15%
-100
- C18 -
-
1F3A
-
GSTA1_MOUSE
A:
[1-79]
---------------------------------
A
G
K
P
-
V
L
H
Y
F
N
---
A
R
G
R
M
E
--------
C
I
R
W
L
-
L
-----------
A
A
A
G
V
E
F
E
------
E
-------
K
----
F
I
Q
S
P
E
D
L
E
----------
K
L
K
K
-
D
G
-
N
L
-
M
------
F
---
D
-
Q
V
----
P
M
V
E
I
D
G
M
K
L
46
Fugue
34.84
13%
24
- C19 -
0.37
2MYW
-
?
A:
[7-85]
-------------------------------SG
R
E
N
L
-
Y
F
Q
G
H
M
---
A
A
P
A
R
F
--------
C
V
Y
Y
D
G
H
L
P
A
------
T
R
V
L
L
M
Y
V
R
I
------
G
-----
T
T
A
----
T
I
T
A
R
G
H
E
F
----------
E
V
E
A
K
D
Q
-
N
C
K
V
------
I
LTN
G
-
K
Q
A
---
P
D
W
L
A
A
E
P
Y
-
31
SP3
33.32
20%
-53
- C19 -
-
1BDO
1
?
?:
[1-80]
-------------------------EISGHIVR
S
P
M
V
G
T
F
Y
R
T
P
---
S
P
D
A
------------
K
A
F
-
I
E
V
G
------
Q
K
V
N
V
G
----------
D
-----
T
L
C
----
I
V
E
A
M
K
M
M
N
----------
Q
I
E
A
-
D
K
-
S
G
T
V
KAILVE
S
---
G
Q
P
V
E
---
F
D
E
P
L
V
V
I
E
-
41
Fugue
31.94
23%
-26
- C22 -
-
1HX2
-
?
A:
[1-60]
--------------------------------------
N
F
V
C
P
P
---
G
Q
T
F
Q
T
--------
C
-------------------
A
S
S
C
P
K
------
T
-----
C
E
T
----
R
N
K
L
----------------
V
L
C
-
D
K
-
K
C
N
Q
------
R
---
C
-
G
C
I
---
S
G
T
V
L
K
S
K
D
S
38
SP3
31.03
20%
-35
* C22 *
-
1HX2
-
?
A:
[1-60]
-----------------------------------
N
F
-
V
C
--
P
P
---
G
Q
T
F
Q
T
--------
C
-------------------
A
S
S
C
P
K
------
T
-------------
C
E
T
R
N
K
L
V
----------
L
--
C
-
D
K
-
K
C
N
Q
------
R
---
C
-
G
C
I
---
S
G
T
V
L
K
S
K
D
S
49
Fugue
30.79
15%
-7
* C21 *
-
2KSS
-
CARS_MYXXA
A:
[21-106]
-----------------------------MIQD
P
S
L
I
-
I
C
H
D
V
D
---
G
A
P
V
R
I
--------
G
A
K
V
K
-
V
V
P
H
------
S
E
D
G
T
I
S
Q
R
F
------
L
-----
G
Q
T
----
G
I
V
V
G
L
V
F
D
DPATQYPDDP
L
I
Q
V
-
L
V
-
E
G
L
G
------
E
---
D
-
L
F
F
---
P
E
E
L
E
L
A
P
E
-
43
Fugue
30.18
16%
-
- C- -
-
4IL7
-
?
A:
[138-222]
----------------------------------
E
N
Y
-
L
I
Y
S
G
F
---
G
T
S
L
P
Q
TYTIPANG
Y
L
I
I
S
-
I
T
N
T
------
S
T
G
N
I
G
Q
I
T
L
------
T
IGSTT
M
T
F
----
N
L
Q
T
G
E
N
K
I
----------
P
V
I
A
-
G
T
-
Q
I
T
N
------
M
---
T
-
L
T
S
---
S
S
A
I
L
I
Y
E
E
V
16
HHSearch
29.24
27%
-528
- C5 -
-
2KHR
-
MBTH_MYCTU
A:
[34-44]
-----------------------------------------------------------------------------------------------------------------------------------------------------
D
I
P
---
A
G
W
R
V
V
H
G
--