@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : IR0088_113560T: (2019-03-29 )
EQDCYYTVWTSNGNSWLRSIRDKTRSDHTLGIHGASVYFDEDCYPHYHSKE
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------...--.--...-.-----.10.-------.------...---------...-----20-.....------.----.------.30..-......40-----.........50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------EQ
D
--
C
--
Y
Y
T
-
V
-----
W
TSN-------
G
------
N
S
W
---------
L
R
S
-----
I
R
-
D
KTRS------D----
H
------
T
L
G
I
H-
G
A
S
V
Y
FD------EDCYPHYHSKE
17
HHSearch
63.51
25%
-88
- C8 -
-
4BJR
1
PAFA_CORGL (first)
A:
[42-90]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
---------
F
R
P
-----
I
V
-
E
K
Y
S
S
------
S
----
N
------
I
F
I
P
N
-
G
S
R
L
Y
L
N
------
V
G
S
H
P
E
Y
A
T
A
E
48
Fugue
62.86
25%
-76
* C9 *
-
1RYJ
-
?
A:
[4-73]
------------------------------------------------------------------------------------------------------------------------------------------------------------------M
V
I
G
--
M
--
K
F
T
-
V
-----
I
T
D
D
-------
G
------
K
K
I
---------
L
E
S
GAPRR
I
K
-
D
V
L
G
E
-------------------
L
E
I
P
-
I
E
T
V
V
V
K
------
K
N
G
Q
I
V
I
D
E
E
E
39
Fugue
62.52
15%
84
* C6 *
-
1NWB
-
Y1857_AQUAE
A:
[2-101]
----------------------------------------------------------------------------------------------------------------------------------------QEQAQQFIFKVTDKAVEEIKKVAQENN
I
E
N
--
P
--
I
L
R
-
I
-----
R
V
V
P
-------
G
------
G
C
S
GFQYA----
M
G
F
-----
D
D
-
T
V
E
E
G
------
D
----
H
------
V
F
E
Y
D
-
G
V
K
V
V
I
D
------
P
F
S
M
P
Y
V
N
G
A
E
38
Fugue
60.05
13%
-96
- C6 -
-
4YN3
-
?
B:
[15-96]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
G
K
--
N
--
I
Y
I
-
V
-----
Y
M
G
R
-------
K
------
L
E
G
---------
S
T
F
-----
A
P
-
E
S
V
L
H
------
T
----
Y
------
K
R
S
F
N
-
G
F
A
V
K
L
T
------
E
E
E
A
E
K
I
A
S
M
E
37
Fugue
58.94
19%
-64
- C7 -
0.15
5AEX
-
MEP2_YEAST
A:
[2-457]
--SYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMT
I
V
Y
--
C
--
P
I
A
-
C
-----
W
V
W
N
-------
A
------
E
G
W
---------
L
V
K
-----
L
G
-
S
L
D
Y
A
------
G
GLCV
H
------
L
T
S
G
H
-
G
G
L
V
Y
A
L
------
I
L
G
K
R
N
D
P
V
T
R
35
Fugue
56.62
21%
-60
- C6 -
-
5DIY
1
?
B:
[2-473]
--------------------------------------------------------------------------------------------EYFRYRGIIEGFYGKPWEHQERLDMFEFMQANNLNAYIYAPKQDLYHRELWREPYKEEQLQLFKELIEKAG
S
C
G
--
I
--
N
F
T
-
F
-----
A
I
S
P
-------
G
------
L
S
L
VYSSEEE--
L
E
T
-----
L
I
-
R
K
I
T
P
------
F
----
L
------
E
M
G
V
H
-
S
I
G
I
F
F
D
------
N
V
P
F
D
L
I
H
E
E
D
33
SP3
54.41
23%
9
- C7 -
-
2BBY
-
?
?:
[175-243]
--------------------------------------------------------------------------------------------------------------------------------------------------RARADKQHVLDMLFSAF
E
K
H
--
Q
--
Y
Y
N
-
L
KDLVD
I
T
K
Q
-------
P
------
V
V
Y
---------
L
K
E
-----
I
L
-
K
E
I
G
V
------
Q
----
N
------
V
K
G
I
H
--
K
N
T
W
E
L
------
K
P
E
Y
R
H
Y
Q
---
26
SP3
54.21
19%
106
- C7 -
0.17
1DEE
-
SPA_STAA8
G:
[1806-1856]
------------------------------------------------------------------------------------------------------------------------------------------------------------------D
Q
Q
S
--
A
--
F
Y
E
-
I
-----
L
N
M
P
-------
N
LNEAQR
N
G
F
---------
I
Q
S
-----
L
K
D
D
P
S
Q
S
------
T
----
N
------
V
L
----
G
E
A
K
K
L
N
------
E
S
Q
A
P
K
-----
41
Fugue
53.83
21%
-95
- C7 -
0.24
1W44
2
?
A:
[1-321]
------------------------------------------------------------------------------------------------------------------------------------------------------MIHLYDAKSFAKL
R
A
A
--
Q
--
Y
A
A
-
F
-----
H
T
D
A
-------
P
------
G
S
W
---------
F
D
H
-----
T
S
-
G
V
L
E
S
------
V
----
E
DGTPVL
A
I
G
V
E
S
G
D
A
I
V
F
D
------
K
N
A
Q
R
I
V
A
Y
K
E
49
Fugue
53.47
19%
-
- C8 -
-
4OZK
-
?
A:
[2-50]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
C
Q
--
C
PD
A
I
S
-
G
-----
W
T
H
T
-------
D
------
Y
Q
C
---------
H
G
L
-----
E
N
-
K
M
Y
R
H
------
V
----
Y
------
A
I
C
M
N
-
G
T
Q
V
Y
----------
C
R
T
E
W
G
S
S
C
44
Fugue
52.75
20%
-
- C3 -
-
2XBG
-
YC48L_THEEB
A:
[38-345]
AIPALDYNPWEAIQLPTTATILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVS
S
R
G
--
S
--
F
Y
S
-
T
-----
W
E
P
G
-------
Q
------
T
A
W
---------
E
P
H
-----
N
R
-
T
T
S
R
R
------
L
----
H
------
N
M
G
F
-----------------------
T
P
D
25
SP3
52.43
13%
25
- C7 -
0.03
1O6W
-
PRP40_YEAST
A:
[1-75]
-----------------------------------------------------------------------------------------------------------------------------------------------------------MSIWKEAK
D
A
S
GR
I
--
Y
Y
Y
-
N
-----
T
L
T
K
-------
K
------
S
T
W
---------
E
K
P
-----
K
E
-
L
I
S
Q
E
------
E
----
L
------
L
L
R
E
N
-
G
W
K
A
A
K
T
------
A
D
G
K
V
Y
Y
Y
N
P
T
7
HHSearch
52.08
27%
24
- C8 -
-
4B0T
1
PAFA_CORGL
B:
[39-75]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
M
---------
F
R
P
-----
I
V
-
E
K
Y
S
S
------
S
----
N
------
I
F
I
P
N
-
G
S
R
L
Y
L
D
------
V
G
S
H
P
E
Y
A
T
A
E
32
SP3
52.02
13%
-50
- C9 -
-
1BT0
3
A:
[1-73]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
--
L
I
K
-
V
-----
K
T
L
T
-------
G
------
K
E
I
EIDIEPTDT
I
D
R
-----
I
K
-
E
R
V
E
E
KEGIPP
V
----
Q
------
Q
R
L
I
Y
-
A
G
K
Q
L
A
D
------
D
K
T
A
K
D
Y
N
I
E
G
40
Fugue
51.57
13%
-35
- C7 -
-0.00
2MFR
-
A:
[1-57]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
Y
--
F
--
Y
V
T
-
D
-----
Y
L
D
V
-------
P
------
S
N
I
---------
A
K
I
-----
I
I
-
G
P
L
I
F
------
V
----
F
------
L
F
S
V
V
-
I
G
S
I
Y
L
F
LRKRQP
D
G
P
L
E
H
H
H
H
H
H
31
SP3
43.54
17%
59
- C7 -
0.09
1J4W
-
A:
[104-174]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
E
--
F
--
N
F
I
-
V
-----
P
T
G
K
TGLIIGK
G
------
G
E
T
---------
I
K
S
-----
I
S
-
Q
Q
S
--------------------------
G
A
R
I
E
L
Q
------
R
N
P
P
P
N
A
D
P
N
M
30
SP3
42.83
17%
7
- C5 -
-
1IBI
-
CSRP2_COTJA
A:
[36-94]
------------------------------------------------------------------------------------------------------------------------------------------------------------AEKCSRC
G
D
S
--
V
--
Y
A
A
E
K
-----
V
I
G
A
-------
G
------
K
P
W
---------
H
K
N
CFRCA
K
C
-
G
K
S
L
E
------
S
----
T
------
T
L
T
E
K
-
E
G
E
I
Y
----------
C
K
G
C
Y
A
K
N
-
1
HHSearch
41.26
43%
-270
- C4 -
-
4KXQ
-
?
B:
[15-26]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Y
I
F
H
-
G
A
E
V
Y
S
D
-----------------
45
Fugue
40.06
16%
-3
* C8 *
-
4AVA
7
PAT_MYCTU
A:
[2-333]
-----------------------DGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGERLLRTARQRLAA
F
V
S
--
P
--
I
P
V
-
R
-----
L
A
D
G
-------
T
------
Q
L
M
---------
L
R
P
-----
V
L
-
P
G
D
R
E
------
R
----
T
------
V
H
G
H
I
-
Q
F
S
---
G
------
E
T
L
Y
R
R
F
M
S
P
A
16
HHSearch
39.59
32%
-238
- C12 -
-
1EOM
-
A:
[13-31]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
--
Y
Y
I
-
T
-----
D
G
R
N
-------
P
------
T
F
K
---------
L
K
D
-----
I
P
-
D
----------------------------------------------------