@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PY36_1_025950T0_kcl20: (2019-03-29 )
GWCKVKVLYRYNSKEAQATYAEIDKETHWNLDGFPIVIKPDGDCTVELVSGWVDHKTYFFKGE
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-.....--.-..10..------.-...-----.----.-----20.----.-.-----.-.------...-----.30-----.-----.-.--.....-.---40---.-.--.....-----.50--.------..------......60..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-
W
C
K
V
K
--
V
-
L
Y
R
YNS------K-EAQ-----
A
----
T
-----
Y
-
A
----E-I-----D-K------ETH-----WN------L-----D-
G
--
F
P
I
V
I
-K---PD---G-
D
--
C
T
V
E
L
-----
V
S
---G------WV------DH
K
T
Y
F
FKGE
36
Fugue
62.56
31%
30
- C8 -
0.16
5JSD
13
?
A:
[172-719]
QTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTVVNNTSNPNVDMTGWVKVSSVSQIFDETYNITQSVINGNLITVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYILKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTAFINCGPTIQNLTARCSNGAGKQVSFIEIDGYLANIDHITLINFYNQIVVKQALVGFNFTNAWLYYSQNAGIYCEDPLNRVSTTGTFHNIYFQLGDGHAMIFDRDVHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPTLDSLPTNNYGGVSVSAEGISIVNAGNKAKMLMLPSGFKTGNATIDETHISSSTVTPLVKRRVIGADSSGAQYLASDTYT
K
-
L
S
R
K
W
--
G
-
T
Y
N
H
G
S
------
N
-
N
A
G
-----
A
----
F
-----
Y
-
A
PMML
T
-
Y
-----
D
-
Q
SF----
S
T
P
-----
Q
N
------
N
-----
N
-
G
--
W
K
I
V
K
-
E
---
S
T
---
G
-
V
--
Y
R
V
E
R
-----
V
S
---
G
---------------
N
T
S
V
I
T
N
G
H
40
Fugue
61.08
20%
54
- C9 -
-
1IPG
-
A:
[1-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAMGSSTSGL
K
-
T
T
K
I
K
--
F
-
Y
Y
K
D
D
I
------
F
-
A
L
M
LKGD-
T
----
T
-----
Y
-
K
----
E
-
L
-----
R
-
S
------
K
I
A
-----
P
R
------
I
DT---
D
-
N
--
F
K
L
Q
T
-
K
---
L
F
---
D
-
G
--
S
G
E
E
I
KTDSQ
V
S
---
N
------
I
I
------
Q
A
K
L
K
I
S
V
H
D
26
Fugue
54.77
25%
-1
- C8 -
0.40
3NO2
3
?
A:
[3-276]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSK
G
----
A
K
M-
I
-
T
R
D
G
R
E
------
L
-
W
N
I
-----
A
----
A
-----
P
-
A
----
G
-
C
-----
E
M
Q
------
T
A
R
-----
I
L
------
P
-----
D
-
G
--
N
A
L
V
A
-
W
---
C
G
---
H
-
P
--
S
T
I
L
E
-----
V
N
MK-
G
------
E
V
------
L
S
K
T
E
F
E
T
G
I
1
PsiBlast_PDB
54.67
27%
-190
- C9 -
-
4AWE
1
?
A:
[163-218]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
-
V
T
R
Y
R
D
------
S
-
E
A
I
-----
L
----
A
-----
W
------
E
-
L
-----
A
-
N
------
E
A
R
-----
C
G
------
A
-----
D
-
G
--
T
R
N
L
P
-
R
---
S
E
---
K
-
G
--
C
T
T
E
T
-----
V
T
---
G
------
W
I
------
E
E
M
S
A
Y
V
K
--
42
SP3
53.78
26%
47
- C8 -
0.17
1PC0
-
RNP1_ARCFU
A:
[17-77]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
L
-
M
V
E
--
V
-
V
E
S
P
N
H
------
S
-
E
V
G
-----
I
----
K
-------
G
----
E
-
V
-----
V
-
D
------
E
T
Q
-----
N
T
------
L
KIMTE
K
-
G
---
L
K
V
V
-
A
---
K
R
---
G
-
R
---
T
F
R
V
-----------------
W
Y
------
K
G
K
I
M
R
I
K
G
D
28
Fugue
53.45
28%
48
- C8 -
0.28
4PQG
2
?
A:
[6-511]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHHMTIYNINLGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANI
G
-
F
D
D
N
Q
--
V
-
I
W
L
Y
N
H
FTDIKI
A
-
P
T
S
-----
V
----
T
-----
V
-
D
----
D
-
V
LAYFG
G
-
E
------
E
S
H
-----
R
E
------
K
-----
N
-
G
--
K
V
L
R
V
-
F
FFD
Q
D
---
K
-
F
--
V
T
C
Y
L
-----
V
D
ENK
D
------
L
V
------
Q
H
A
E
Y
V
F
K
G
N
43
SP3
52.99
23%
55
- C- -
-
1PWT
-
?
?:
[1-61]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGT
G
-
K
E
L
V
L
--
A
-
L
Y
D
Y
Q
E
------
K
-
S
P
R
-----------------------
E
-
V
-----
T
-
M
------
K
K
G
-------------------
D
-
I
--
L
T
L
L
N
-
S
---
T
N
---
K
-
D
W-
W
K
V
E
V
ND---
R
Q
---
G
------
F
V
------
P
A
-
A
Y
V
K
K
L
D
35
Fugue
48.78
19%
39
- C9 -
-
1OEY
-
NCF2_HUMAN
A:
[347-428]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS
H
M
A
Y
T
L
K
--
V
-
H
Y
K
Y
T
V
------
V
M
K
T
Q
PGLPY
S
----
Q
-----
V
-
R
----
D
M
V
-----
S
-
K
------
K
L
E
-----
L
R
------
L
-----
E
-
H
--
T
K
L
S
Y
-
R
---
P
R
---
D
-
S
--
N
E
L
V
P
-----
L
S
---
E
DSMKDA
W
G
------
Q
V
K
N
Y
C
L
T
L
W
49
SP3
48.03
15%
-54
- C8 -
-
1BTN
1
?
?:
[1-106]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEGFLNRKHEWEAHNKKASSRSWHN
V
-
Y
C
V
I
N
NQ
E
-
M
G
F
Y
K
D
------
A
-
K
S
A
-----
A
----
S
-----
G
-
I
----
P
-
Y
-----
H
-
S
------
E
V
P
-----
V
S
------
L
-----
K
-
E
--
A
I
C
E
V
-
A
---
L
D
YKK
K
-
K
--
H
V
F
K
L
-----
R
L
-----------
S
------
D
G
N
E
Y
L
F
Q
A
K
33
Fugue
46.47
19%
16
- C9 -
-
4ZDT
3
SLX4_SCHPO
B:
[1-69]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
-
S
M
I
V
T
--
Q
-
T
H
R
A
I
S
------
Q
-
V
V
K
-----
Q
----
A
KDNSV
W
-
I
----
K
-
I
-----
L
-
T
------
Y
S
A
-----
I
D
------
V
-----
E
-
E
--
F
Q
L
W
L
-
K
---
R
K
---
N
L
N
--
V
S
L
D
L
-----
I
K
---
S
------
W
C
------
D
K
Y
G
V
L
M
K
G
S
46
SP3
45.49
17%
-22
- C8 -
0.25
1E2W
-
CYF_CHLRE
A:
[169-232]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
Y
N
A
------
S
-
A
A
------
G
----
K
-----
I
-
V
----
A
-
I
-----
T
-
A
------
L
S
E
-----
K
K
------------
G
-
G
--
F
E
V
S
I
-
E
K--
A
N
---
G
-
E
--
V
V
V
D
K
-----
I
P
---
A
------
G
P
------
D
L
I
V
K
--
E
G
Q
45
SP3
45.40
19%
32
- C8 -
0.24
1D1L
-
RCRO_LAMBD
A:
[1-61]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
Q
R
--
I
T
L
K
D
Y
A
M
------
R
-
F
G
Q
-----
T
----
K
-----
T
-
A
----
K
-------
D
-
L
------
G
V
Y
-----
Q
S
AINKAI
H
-----
A
-
G
RK
I
F
L
T
I
-
N
---
A
D
---
G
-
S
--
V
Y
A
E
E
-----
V
K
---
P
------
W
P
------
S
N
--------
30
Fugue
44.40
12%
-11
- C9 -
-
1Q5Y
1
NIKR_ECOLI
A:
[2-85]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQ
G
-
F
A
V
L
S
--
Y
-
V
Y
E
H
E
K
------
R
-
D
L
A
-----
S
----
R
-----
I
-
V
----
S
-
T
-----
Q
-
H
------
H
H
H
-----
D
L
------
S
-----
V
-
A
--
T
L
H
V
H
-
I
---
N
H
---
D
-
D
--
C
L
E
I
A
-----
V
L
---
K
------
G
D
------
M
G
D
V
Q
H
F
A
D
D
50
SP3
42.74
15%
50
- C8 -
0.22
1OQK
-
RNP1_METTH
A:
[9-86]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RHELI
G
-
L
-
S
V
R
--
I
-
A
R
S
V
H
R
------
D
-
I
-
Q
-----
G
----
I
-----
S
-
G
----
R
-
V
-----
V
-
D
------
E
T
R
NTLRI
E
M
------
D
-----
D
-
G
--
R
E
I
T
V
-
P
---
K
G
---
I
-
A
V-
F
H
F
R
T
-----
P
Q
---
G
----------------
E
L
V
E
I
D
G
R
48
SP3
41.81
12%
-23
- C8 -
0.34
1YEZ
-
?
A:
[1-68]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
F
R
E
E
S
------
R
-
S
V
P
-----
V
EEGE
V
-----
Y
D
V
----
T
-
I
-----
Q
-
D
------
I
A
R
-----
Q
G
DGIAR-
I
-----
E
-
G
--
F
V
I
F
V
-
P
GTK
V
G
---
D
-
E
--
V
R
I
K
V
-----
E
R
------------------
V
L
P
K
F
A
F
-
A
S
27
Fugue
39.27
30%
86
- C8 -
0.08
1V74
1
A:
[1-107]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNDPLDSGRFSRKQLDKKYKHAGDFGISDTKKNRETLTKFRDAIEEHLSD
K
-
D
T
V
E
K
--
G
-
T
Y
R
R
E
K
------
G
-
S
------------------------------------------
K
V
Y
-----
F
N
------
P
-----
N
-
T
--
M
N
V
V
I
I
K
---
S
N
---
G
-------
E
F
-----
L
S
---
G
------
W
K
INPDAD
N
G
R
I
Y
L
E
T
G
E
47
SP3
37.64
11%
-31
* C8 *
0.30
1CSK
-
CSK_HUMAN
A:
[11-68]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
--
T
E
C
I
--
A
-
K
Y
N
F
H
G
------
T
-
A
E
Q
-----------------------
D
-
L
-----
P
-
F
------
C
K
G
-------------------
D
-
V
--
L
T
I
V
A
-
V
---
T
K
---
D
-
P
NW
Y
K
A
K
N
-----
K
V
---
G
----------------
R
E
G
I
I
P
A
N
25
Fugue
36.52
24%
-72
- C9 -
-
5JHI
-
?
A:
[1-35]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
K
Q
R
--
R
-
R
Y
R
G
S
E
------
E
-
E
C
R
-----
K
----
Y
-----
A
-
E
----
E
-
L
-----
S
-
R
RTGCEV
E
V
E
-----
C
E
------
T
----------------------------------------------------------------------
31
Fugue
36.49
15%
114
- C8 -
0.22
1WIE
-
A:
[1-96]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGTSKQRYSG
K
-
V
H
L
C
V
--
A
-
R
Y
S
Y
N
P
------
F
-
D
G
P
-----
N
----
E
--------------------
N
-
P
------
E
A
E
-----
L
P
------
L
-----
T
A
G
--
K
Y
L
Y
V
-
Y
---
G
D
---
M
-
D
--
E
D
G
F
Y
-----
E
G
---
E
------
L
L
------
D
G
Q
R
G
L
V
P
S
N
29
Fugue
33.77
21%
-59
- C9 -
-
2MKX
-
A:
[1-51]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
N
--
T
-
Y
Y
T
V
K
S
------
G
-
D
T
L
-----
N
----
K
-----
I
-
A
----
A
-
Q
-----
Y
-
G
------
V
S
V
-----
A
N
------
L
-----
R
-
S
--
W
N
----
G
---
I
S
---
G
-
D
--
L
I
--------------------
F
V
------
G
Q
K
L
I
V
K
K
G
S