@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PY36_1_114780T0_kcl61: (2019-03-29 )
KLCKWTVLNSEGEIIDSGSCLNTEYMKHGDIHVEFENDCTPIIFGADRVAEKVTIKG
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....-----..---------..-.10....--....-----20-...--------.-..-.-..30......-...40...-..-...50......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KL
C
K
-----
W
T
---------
V
L-NSEG
E
I
I--DSGS-----C--L
N
T
--------
E
-
Y
M-K-HG
D
-
I
H
V
E
FE-NDC
T
P
I
I
F
-
G
A
-
D
R
V
A
E
K
V
TIKG
4
PsiBlast_PDB
64.62
31%
-90
- C9 -
0.00
4HR6
-
?
C:
[45-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
W
T
----------
F
-
H
S
D
G
T
V
R
--
S
L
G
K
-----
C
--
L
A
T
--------
N
-
N
S
-
K
-
F
G
N
-
L
V
V
I
Y
---
D
C
S
K
L
---
A
A
-
E
D
I
S
W
D
V
S
V
G
G
5
PsiBlast_PDB
61.18
31%
-82
- C9 -
0.12
5Y42
-
?
C:
[45-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
W
T
----------
F
-
H
S
D
G
T
V
R
--
S
L
G
K
-----
C
--
L
A
T
--------
N
-
N
S
-
K
-
F
G
N
-
L
V
V
I
Y
---
D
C
S
K
L
---
A
A
-
E
D
I
S
W
D
V
S
V
G
G
6
PsiBlast_PDB
60.98
31%
-106
- C9 -
-0.03
5Y97
-
?
C:
[45-93]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-----
W
T
----------
F
-
H
S
D
G
T
V
R
--
S
L
G
K
-----
C
--
L
A
T
--------
N
-
N
S
-
K
-
F
G
N
-
L
V
V
I
Y
---
D
C
S
K
L
---
A
A
-
E
D
I
S
W
D
V
S
V
G
G
52
SP3
60.66
28%
-25
* C9 *
0.00
1ABR
-
?
B:
[1-267]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVEKSKICSSRYEPTVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEEN
Q
L
-------
W
T
---------
L
--
K
S
D
K
T
I
R
--
S
N
G
K
-----
C
--
L
T
T
--------
Y
-
G
Y
-
A
-
P
G
S
Y
V
M
I
Y
----
D
C
T
-----
S
A
-
V
A
E
A
T
Y
W
E
I
W
D
47
SP3
57.89
24%
50
- C9 -
0.35
1U3E
5
HMUI_BPSP1
M:
[1-174]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEW
K
D
I
K
GYEGH
Y
Q
---------
V
S
-
N
T
-
G
E
V
Y
SI
K
S
G
K
-----
T
--
L
K
H
--------
Q
-
I
P
-
K
-
D
G
Y
-
H
R
I
G
L
F
-
K
G
G
K
G
K
T
F
-
Q
V
-
H
R
L
V
A
I
H
F
C
E
G
36
Fugue
55.72
26%
69
- C- -
-
4CHE
-
PB2_THOGV
A:
[326-485]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTMKI
R
S
T
K
-----
F
S
---------
I
L
-
N
S
D
H
P
R
I
--
E
V
K
K
-----
V
--
F
S
L
SPDVQVTI
P
-
Y
R
-
R
F
K
G
K
-
A
K
V
Y
F
Q
-
N
D
Q
I
Q
G
Y
F
-
S
C
T
D
R
Q
I
D
E
I
K
I
S
A
50
SP3
55.22
28%
38
- C10 -
-
1TG7
11
BGALA_PENSQ
A:
[1-971]
LLQKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLGHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPGYLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSDYSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHEFAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPG
Y
S
N
Q
-----
E
T
---------
T
A
-
S
S
--
I
I
V
--
K
A
G
Y
-----
L
--
V
R
S
--------
A
-
Y
L
-
D
-
G
N
D
-
L
H
I
Q
A
D
F
N
A
T
T
P
I
E
V
V
G
A
-
P
S
G
A
K
N
L
V
I
N
G
38
Fugue
48.77
12%
-34
- C9 -
0.34
2MM2
-
?
A:
[1-65]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
-----
A
N
---------
I
L
-
N
I
N
E
V
V
I
--
A
T
G
C
VPAGG
N
--
L
I
I
--------
R
-
V
G
-
S
-
D
H
S
-
Y
L
I
R
A
T
-
V
S
C
G
L
S
L
N
-
P
S
-
Q
S
F
I
N
G
E
S
L
A
S
40
Fugue
46.60
26%
24
- C8 -
-
5EY9
5
FAA32_MYCMM
A:
[3-626]
----------------------------------------------------------------------------------------------------------------------YHNPFIVNGKIRFPENTNLVRHVEKWARVRGDKLAYRFLDFSTERDGVERDILWSEFSARNRAVGARLQQVTQPGDRIAILCPQNLDYLISFFGALYSGRIAVPLFDPAEHVGRLHAVLDDCTPSTILTTTDSAEGVRKFIRSRSAKERPRVIAVDAVPTEVASTWQQPNELTTAYLQYTVPSGVQITHLNLPTNVLQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAMRGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFKAFEPYGLRETAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDELNKQRFVEVAADAPNAVAQVSAGKVGVDEWAVIVDTETASELPDGQIGEIWLHGNNLGIGYWGKEEESAQTFR
N
I
L
K
-----
S
R
---------
V
P
-
E
S
H
A
E
------
G
A
-----
P
--
D
D
G
--------
L
-
W
V
-
R
-
T
G
D
-
Y
G
T
Y
F
K
-
G
----
H
L
Y
-
I
A
-
G
R
I
K
D
L
V
I
I
D
G
43
Fugue
45.63
21%
16
- C9 -
0.35
2KAF
-
R1A_CVHSA
A:
[1-67]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSEE
H
F
V
E
-----
T
V
---------
S
L
A
G
S
Y
R
D
W
S
--
Y
S
G
Q
-----
R
TE
L
G
V
--------
E
-
F
L
-
K
-
R
G
D
-
K
I
V
Y
H
T
-
L
E
S
P
V
E
F
H
-
L
D
-
G
E
V
L
S
L
D
K
L
K
S
34
Fugue
45.31
35%
46
- C7 -
-
4KYI
5
?
A:
[4-544]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSEISKTEAGQYSVSAPEHKGLVLSGGGAKGISYLGMIQALQERGKIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDITKLLDNSGVGFRARGDRFRNILDVIYMMQMKKHLESVQQPIPPEQQMNYGILKQKIALYEDKLSRAGIVINNVDDIINLTKSVKDLEKLDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVTNQTKHELERYSEDTTPQQSIA
Q
V
V
Q
-----
W
S
GAHPVLFVP
G
R
-
N
A
K
G
E
Y
I
--
A
D
G
G
-----
I
--
L
D
N
--------
M
---------------------
P
E
I
E
-
G
L
-
D
R
-
E
E
V
L
C
V
K
A
18
HHSearch
43.99
33%
-342
- C14 -
-
2G7Z
-
Y1493_STRP1
A:
[9-34]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
T
--
D
S
S
I
-----
T
--
I
E
P
--------
E
-
L
I
-
K
-
A
L
D
-
I
T
V
---------------------------
8
HHSearch
41.67
25%
-310
- C14 -
-
6B9I
1
?
A:
[6-30]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
--
D
S
T
S
-----
Y
--
L
S
Q
--------
D
-
L
I
-
D
-
K
Y
N
-
I
Q
I
---------------------------
11
HHSearch
41.46
29%
-281
- C14 -
-
3NYI
-
?
B:
[7-27]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
S
--
D
S
A
C
-----
D
--
L
S
K
--------
E
-
Y
L
-
E
-
K
H
D
-
V
T
I
---------------------------
12
HHSearch
41.20
33%
-259
- C14 -
-
1PZX
-
?
B:
[7-27]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
I
T
--
D
S
G
A
-----
D
--
L
P
Q
--------
S
-
Y
I
-
R
-
E
H
R
-
I
A
F
---------------------------
10
HHSearch
40.66
29%
-251
- C14 -
-
3NYI
-
?
A:
[7-27]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
S
--
D
S
A
C
-----
D
--
L
S
K
--------
E
-
Y
L
-
E
-
K
H
D
-
V
T
I
---------------------------
7
PsiBlast_PDB
40.56
31%
41
- C- -
-
3R0E
-
?
A:
[8-39]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
Q
-----
T
--
L
D
T
--------
E
G
H
L
-
K
-
N
G
D
-
F
D
L
V
M
Q
-
D
D
C
N
L
V
L
Y
-
N
G
-
N
----------
9
HHSearch
39.74
24%
-284
- C14 -
-
5UTO
-
YU230_STAAU
A:
[25-45]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
M
T
--
D
S
T
S
-----
Y
--
L
S
Q
--------
D
-
L
I
-
D
-
K
Y
N
-
I
Q
I
---------------------------
51
SP3
39.36
19%
57
- C9 -
0.34
1FGU
-
RFA1_HUMAN
A:
[181-298]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKVVPIASLTPYQSKWTICARVTN
K
S
Q
I
-----
R
T
---------
W
S
-
N
S
R
G
E
G
K
-----------
L
--
F
S
L
--------
E
-
L
V
D
E
-
S
G
E
-
I
R
A
T
A
F
-
N
E
Q
-------
V
-
D
K
F
F
P
L
I
E
-
V
N
2
PsiBlast_PDB
38.25
34%
13
- C9 -
0.20
5T20
3
?
A:
[8-39]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
Q
-----
T
--
L
N
T
--------
D
G
H
L
-
K
-
N
G
D
-
F
D
L
V
M
Q
-
N
D
C
N
L
V
L
Y
-
N
G
-
N
----------