@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : new_query: (2019-03-29 )
EVRPITDFRLNAFNKRVPGCEFGIFYKLLDDGGTLIGTQVERVGRSKYSWKFVPYEFAGCKWDKECNPIDKK
Atome Classification :
(20 SA)
----------------------------------------------------------------------------.......----..10--.----------......--.-.20.-.......---------30.---..--.-.---.-------..40.-..--.--....50-..-....-..-----60---.----.-----..---..-------..70-.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------EVRPITD----FRL---N----------AFNKRV--P-GCEF-GIFYKLL---------DDG---GT--L-I---G-------TQVER-VG--R--SKYSWK-FV-PYEF-AG-----CK---W----D-----KE---CN-------PIDK-K
30
Fugue
69.38
25%
93
* C9 *
-
2EEB
-
A:
[1-106]
-------------------------------------------------------------------GSSGSSGSD
D
A
R
R
L
T
V
----
M
S
L
---
Q
ESGLKVNQPA
S
F
A
I
R
L
--
N
-
G
A
K
G
-
K
I
D
A
K
V
H
---------
S
P
S
---
G
A
--
V
-
E
---
E
-------
C
H
V
S
E
-
L
E
--
P
--
D
K
Y
A
V
R
-
F
I
-
P
H
E
N
-
G
V
-----
H
T
---
I
----
D
-----
V
K
---
F
N
GSHVVGS
P
F
K
V
-
R
41
Fugue
64.04
18%
-42
- C8 -
0.26
4R30
4
EPM2A_HUMAN
A:
[6-184]
QAMHYSRILPNIWLGSCPRQVEHVTIKLKHELGITAVMNFQTEWDIVQNSSGCNRYPEPMTPDTMIKLYREEGLAY
I
W
M
P
T
P
D
----
M
S
T
---
E
----------
G
R
V
Q
M
L
--
P
-
Q
-
A
V
-
C
L
L
H
A
L
L
---------
E
K
G
---
H
I
--
V
-
Y
---
V
-------
H
S
N
A
G
-
V
G
--
R
--
S
T
A
A
V
C
-
G
W
-
L
Q
Y
V
-
M
G
-----
W
N
---
L
----
R
-----
K
V
---
Q
Y
-------
F
L
M
A
-
K
45
Fugue
62.28
26%
53
- C8 -
0.30
5FT3
-
?
B:
[1-221]
--------------------------------------------MTKLILYTLHVSPPCRAVELCAKALGLELEQK
T
V
N
L
L
T
K
----
E
H
L
T--
P
----------
E
F
M
K
M
N
--
P
-
Q
H
T
V
-----
P
V
L
---------
D
D
N
---
G
T
--
I
-
V
---
C
ESHAIMI
Y
L
V
S
K
-
Y
G
--
K
DD
S
L
Y
S
K
E
-
L
V
-
K
Q
A
K
-
L
N
-----
A
A
---
L
----
H
-----
F
E
---
S
G
-------
V
L
F
A
-
R
53
SP3
58.77
15%
96
- C8 -
0.38
1Y8R
1
SUMO1_HUMAN
C:
[14-97]
---------------------------------------------------------------------------G
D
K
K
E
G
E
Y
----
I
K
L
---
K
----------
V
I
G
Q
D
-----
S
S
E
---
I
H
F
K
V
K
---------
M
T
T
---
H
L
KK
L
-
K
---
E
-------
S
Y
C
Q
R
-
Q
G
--
V
--
P
M
N
S
----
L
-
R
F
L
F
-
E
G
-----
Q
R
---
I
----
A
-----
D
N
---
H
T
-------
P
K
E
L
-
G
49
SP3
57.44
23%
35
- C9 -
-
1CVR
-
CPG2_PORGI
A:
[351-432]
--------------------------------------------------------------------------PT
E
M
Q
V
T
A
P
----
A
N
I
---
S
----------
A
S
A
Q
T
F
--
E
V
A
C
D
Y
N
G
A
I
A
T
L
S
---------
D
D
G
DMV
G
T
--
A
-
I
VKD
G
-------
K
A
I
I
K
-
L
N
--
E
--
S
I
A
D
E
T
-
N
L
-
T
L
T
V
-
V
G
----------
Y
----
N
-----
K
V
---
T
V
-------
I
K
D
V
-
K
48
SP3
56.93
12%
83
- C9 -
-
1QFH
-
GELA_DICDI
A:
[646-749]
---------------------------------------------------------KPAPSAEHSYAEGEGLVKV
F
D
N
A
P
A
E
----
F
T
I
FAV
D
----------
T
K
G
V
A
R
--
T
-
D
G
G
D
-
P
F
E
V
A
I
N
---------
G
P
D
---
G
L
--
V
-
V
---
D
-------
A
K
V
T
D
-
N
N
--
D
--
G
T
Y
G
V
V
-
Y
D
-
A
P
V
--
E
G
NYNVN
V
T
---
L
----
R
-----
G
N
PIK
N
M
-------
P
I
D
V
-
K
31
Fugue
56.77
26%
19
* C14 *
-
4GVB
-
?
B:
[4-81]
-----------------------------------------------------------------------------
P
R
P
V
M
C
----
Q
C
V
---
D
----------
T
T
N
G
G
V
--
R
--------
L
D
A
V
T
---------
R
A
A
---
C
S
--
I
-
D
---
G
-------
Y
Y
T
E
K
-
D
G
FC
R
--
A
K
Y
S
W
D
L
F
T
-
S
G
Q
F
Y
Q
A
-----
C
L
---
R
YSHA
G
-----
T
N
---
C
Q
-------
P
D
P
Q
-
Y
44
Fugue
52.07
18%
60
- C9 -
-
2NAX
-
A:
[1-76]
----------------------------------------------------------------------------
G
G
S
E
F
S
D
RSNE
L
E
I
---
R
----------
G
K
Y
V
V
V
--
P
-
E
T
S
Q
-
D
M
A
F
K
C
P
---------
I
C
K
---
E
T
--
V
-
T
---
G
-------
V
Y
D
E
E
-
S
G
------
E
W
V
W
K
-
N
--
T
I
E
V
-
N
G
-----
K
Y
---
F
----
H
-----
S
T
---
C
Y
-------
H
E
T
S
-
Q
50
SP3
51.14
19%
56
- C9 -
-
3EBX
-
?
?:
[1-62]
---------------------------------------------------------------------RICFNHQ
S
S
Q
P
Q
T
------------------------
T
K
T
C
--
S
-
P
G
E
S
-
S
C
Y
H
K
Q
W
---------
S
D
F
---
R
---------
G
-------
T
I
I
E
R
G
C
G
--
C
--
P
T
V
K
P
-----
G
I
K
L
-
S
C
-----
C
E
---
S
----
E
-----
V
----
C
N
-------
N
-----
54
SP3
50.66
15%
31
- C9 -
-
1PSD
1
SERA_ECOLI
A:
[326-409]
------------------------------------------------------------------------FPEV
S
L
P
L
H
G
G
----
R
R
L
---
M
----------
H
I
H
E
N
R
--
P
-
G
V
-
L
-
T
A
L
N
K
I
F
---------
A
E
Q
---
G
V
--
N
-
I
---
A
-------
A
Q
--
Y
-
L
Q
--
T
--
S
A
-
Q
M
G
-
Y
V
-
V
I
D
I
-
E
A
-----
D
E
---
D
----
V
AEKAL
Q
A
---
M
K
-------
A
I
P
G
-
T
37
Fugue
48.21
16%
32
- C8 -
0.01
4P5W
-
CMC2_HUMAN
A:
[31-394]
------------------TKRADPAELRTIFLKYASIEKNGEFFMSPNDFVTRYLNIFSQPNPKTVELLSGVVDQT
K
D
G
L
I
S
F
----
Q
E
F
---
V
----------
A
F
E
S
V
L
CA
P
-
D
A
L
F
-
M
V
A
F
Q
L
F
---------
D
K
A
---
G
K
GE
V
-
T
---
F
-------
E
D
V
K
Q
-
V
F
--
G
--
Q
T
T
I
H
Q
-
H
I
-
P
F
N
W
-
D
S
-----
E
F
---
V
----
Q
-----
L
H
---
F
G
-------
K
E
R
K
-
R
38
Fugue
47.34
13%
-9
- C8 -
0.21
3EUJ
-
B:
[63-152]
------------------------------------------------------------------------DVQT
Q
I
V
T
A
I
Q
----
A
E
L
---
A
----------
H
F
R
N
T
A
--
Q
-
P
I
N
L
-
G
A
V
L
Q
E
Q
LARYPQSRH
F
D
V
---
A
R
--
I
-
I
---
V
-------
D
Q
A
V
K
-
L
G
--
M
--
A
S
Q
D
H
Q
-
A
V
-
Y
P
V
W
-
Q
P
-----
I
D
DFS
A
----
A
-----
V
Q
---
A
H
-------
L
I
D
Q
-
Y
40
Fugue
46.95
16%
111
- C8 -
0.10
4MYY
-
?
A:
[2-85]
--------------------------------------------------------------------------SA
L
E
A
K
L
L
D
----
E
I
K
---
Q
----------
S
S
N
Q
E
L
--
E
-
S
S
I
D
-
Q
I
L
E
S
I
I
---------
N
G
G
---
S
M
--
L
-
N
---
K
F------
T
K
K
E
Q
-
I
L
--
S
--
E
K
Q
Q
I
K
-
Q
L
S
P
L
Q
R
-
A
A
-----
L
A
---
L
----
K
-----
K
L
---
E
T
-------
K
L
N
N
-
T
42
Fugue
45.56
15%
13
- C8 -
0.19
4QVG
-
?
A:
[4-344]
-------------------------------------------------------------------------ELS
A
L
V
P
V
L
-----
F
G
H
---
A
----------
A
F
Q
Q
L
N
--
A
-
G
C
Q
L
-
G
L
F
E
L
L
H
---------
E
R
G
---
P
L
--
S
-
A
---
E
-------
E
V
A
D
A
-
L
R
--
L
--
P
R
R
S
A
D
-
I
L
-
L
L
G
T
-
T
A
-----
L
G
---
L
----
S
-----
T
V
---
T
D
-------
G
G
Y
R
-
N
55
SP3
44.55
20%
25
* C8 *
0.11
1D1L
-
RCRO_LAMBD
A:
[1-61]
---------------------------------------------------------------------------M
E
Q
R
-
I
T
-------
L
---
K
----------
D
Y
A
M
R
--------
F
-
G
Q
-
T
K
T
A
---------
K
D
L
---
G
---
V
-
Y
---
Q
-------
S
A
I
N
K
-
A
I
--
H
--
A
G
R
K
-
I
-
F
L
-
T
I
N
A
-
D
G
-----
S
V
---
Y
----
A
-----
E
E
---
V
K
-------
P
W
P
S
-
N
33
Fugue
43.44
11%
-1
- C8 -
0.23
4G6Q
-
?
A:
[6-182]
-------------------------------------------------TTGQMPATSSLVDLLHHPLRWRITQLL
I
G
R
S
L
T
T
----
R
E
L
---
A
----------
E
L
L
P
D
V
--
A
-
T
T
T
L
-
Y
R
Q
V
G
I
L
---------
V
K
A
---
G
V
--
L
M
V
---
T
-------
A
E
H
Q
V
-
R
G
--
A
--
V
E
R
T
Y
T
-
L
N
-
T
Q
A
G
-
D
A
-----
D
H
---
D
----
G
-----
V
D
---
A
D
-------
R
L
R
T
M
F
16
HHSearch
41.62
33%
-97
* C15 *
-
5M4S
-
A:
[162-185]
---------------------------------------------------------------------------------------------------------------------------------------
F
D
T
---
E
N
--
V
-
V
---
V
-------
C
Q
Y
D
K
-
I
H
--
R
--
S
K
N
K
W
K
-
F
H
-------------------------------------------------
22
HHSearch
41.00
14%
-188
- C5 -
-
1HX7
-
TNR1_ECOLI
A:
[48-76]
---------------------------------------------------------------------------------------------------------------------
L
-
D
L
L
R
M
K
V
---------
E
E
G
---
D
V
--
I
-
L
---
V
-------
K
K
L
D
R
-
L
G
--
R
--
D
T
A
D
M
-----------------------------------------------------
18
HHSearch
38.03
26%
-93
- C15 -
-
5FMF
-
?
M:
[239-261]
----------------------------------------------------------------------------------------------------------------------------------------
P
D
---
E
N
--
L
-
M
---
L
-------
C
L
Y
D
K
-
V
T
--
R
--
T
K
A
R
W
K
-
C
S
-------------------------------------------------
8
HHSearch
38.02
29%
-116
- C15 -
-
1NH2
-
?
C:
[34-54]
---------------------------------------------------------------------------------------------------------------------------------------------
E
N
--
L
-
M
---
L
-------
C
L
Y
D
K
-
V
T
--
R
--
T
K
A
R
W
K
-
C
S
-------------------------------------------------