@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SSFL02_099270T0_kcl21: (2019-03-29 )
GAIVKAKCPYTAFMHRNAKLKPVIYGEADANSEEQISFAKVKFAPDCKILESSGGK
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......---..10...-.....-.20------------..-.----------.-...----.30.----...---.----...40...--..---.------..-50.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA
I
V
KAK---CP
Y
-
T
A
F
-MHRNA-KL
K
------------
P
V
-
I
----------
Y
-GEA----DANS----EE
Q
---
I
----
S
F
A
K
V
K
FA--PD---
C
------
K
I
-LESSGGK
32
SP3
80.80
26%
10
- C5 -
0.50
1YTB
-
TBP_YEAST
A:
[61-155]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFA
A
V
I
M
R
I
R
---
E
P
K
T
T
A
L
-
I
F
A
S
G
---
K
------------
M
V
-
V
----------
T
-
G
-------
A
K
S
----
E
D
D
---
S
----
K
L
A
S
R
K
Y
A
--------------
R
I
-
I
Q
K
I
G
F
A
37
SP3
64.41
23%
48
- C7 -
-
1R8N
-
DRTI_DELRE
A:
[1-185]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRP
G
R
T
R
G
S
M
---
C
P
M
-
S
I
I
-
Q
E
Q
S
D
-
L
Q
M
GL----------
P
V
-
R
----------
F
-
S
S
P
----
E
E
K
Q
GKIY
T
D
T
ELE
I
----
E
F
V
E
---
K
--
P
D
---
C
AESSKW
V
I
-
V
K
D
S
G
E
A
33
SP3
63.83
28%
133
- C5 -
0.47
1AIS
-
TBP_PYRWO
A:
[1-92]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFP
G
I
I
C
H
L
D
---
D
P
K
-
V
A
L
L
I
F
S
S
G
-
K
--------------
L
V
-
V
----------
T
-
G
-------
A
K
S
----
V
Q
D
---
I
----
E
R
A
V
A
K
L
A
--------------
Q
K
-
L
K
S
I
G
V
-
17
Fugue
58.83
21%
63
* C4 *
-
5K1A
-
WDR48_HUMAN
B:
[14-675]
KVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGTPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPPKLNLG
G
L
L
L
Q
A
L
---
L
E
Y
-
W
P
R
-
T
H
V
N
P
-
M
V
Q
KGNGYFQVPPHT
P
V
-
I
----------
F
-
G
E
A
----
G
G
R
T
----
L
F
R
---
L
----
L
C
R
D
S
G
G
E
--
T
E
---
S
------
M
L
-
L
N
E
T
V
P
Q
3
PsiBlast_PDB
58.14
40%
-70
- C5 -
1FDI
-
FDHF_ECOLI
A:
[70-99]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
R
G
G
-
K
L
E
------------
P
V
-
S
----------
W
-
D
E
A
----
L
N
Y
V
----
A
E
R
---
L
----
S
A
I
K
E
K
Y
G
--
P
D
--------------------
27
Fugue
52.28
18%
64
- C4 -
-
2AI6
-
PHP14_HUMAN
A:
[1-125]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAVADLALIPDVDIDSDGVFKYVLIRVHSAPRSGAPAAESKEIVRGYKWAEYHADIYDKVSGDMQ
K
Q
G
C
D
C
E
---
C
L
G
-
G
G
R
-
I
S
H
Q
S
-
Q
D
K
------------
K
I
H
V
----------
Y
-
G
Y
S
MAYG
P
A
Q
H
----
A
I
S
---
T
----
E
K
I
K
A
K
Y
---
P
D
---
Y
------
E
V
-
T
W
A
N
D
G
Y
4
PsiBlast_PDB
51.42
40%
31
- C5 -
1FDO
-
FDHF_ECOLI
A:
[70-99]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
R
G
G
-
K
L
E
------------
P
V
-
S
----------
W
-
D
E
A
----
L
N
Y
V
----
A
E
R
---
L
----
S
A
I
K
E
K
Y
G
--
P
D
--------------------
1
PsiBlast_PDB
51.28
40%
41
- C5 -
2IV2
-
FDHF_ECOLI
X:
[70-117]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
R
G
G
-
K
L
E
------------
P
V
-
S
----------
W
-
D
E
A
----
L
N
Y
V
----
A
E
R
---
L
----
S
A
I
K
E
K
Y
G
--
P
D
--------------------
34
SP3
49.00
19%
13
* C7 *
-
1AVA
-
IAAS_HORVU
C:
[1-181]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADPPPVHDTDGHELRADANYYVLSANRAHGGGLTM
A
P
G
H
G
R
H
---
C
P
L
-
F
V
S
-
Q
D
P
N
G
-
Q
H
D
GF----------
P
V
-
R
----------
I
-
T
P
Y
----
G
V
A
P
----
S
D
K
---
I
IRLS
T
D
V
R
I
S
F
R
AY
T
T
---
C
LQSTEW
H
I
D
S
E
L
A
A
G
R
28
Fugue
48.83
23%
38
- C5 -
0.23
2B68
-
?
A:
[1-43]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
F
G
---
C
P
G
-
N
Q
L
-
K
C
N
N
H
C
K
S
I
------------
S
C
-
R
----------
A
-
G
Y
C
----
D
A
A
T
---------------------
L
W
--
L
R
---
C
------
T
C
-
T
D
C
N
G
K
K
2
PsiBlast_PDB
48.06
40%
97
- C5 -
1AA6
-
FDHF_ECOLI
A:
[70-117]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
R
G
G
-
K
L
E
------------
P
V
-
S
----------
W
-
D
E
A
----
L
N
Y
V
----
A
E
R
---
L
----
S
A
I
K
E
K
Y
G
--
P
D
--------------------
35
SP3
48.04
12%
43
- C5 -
0.25
1WWR
-
TADA_AQUAE
A:
[18-171]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMGKEYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLE
G
C
E
L
Y
V
T
LEP
C
I
M
-
C
S
Y
-
A
L
V
L
S
-
R
I
E
------------
K
V
-
I
----------
F
-
S
A
L
----
D
K
K
H
----
G
G
V
---
V
----
S
V
F
N
I
L
D
E
--
P
T
---
L
------
N
H
R
V
K
W
E
Y
Y
P
38
SP3
47.19
21%
19
- C5 -
0.13
1D4O
1
A:
[5-181]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
H
T
E
I
N
---
L
D
N
-
A
I
D
-
M
I
R
E
A
-
N
-
S
------------
I
I
-
I
----------
T
P
G
Y
G
----
L
C
A
A
----
K
A
Q
---
Y
----
P
I
A
D
L
----------
V
------
K
M
-
L
S
E
Q
G
K
K
18
Fugue
47.07
16%
72
- C4 -
-
4GJT
-
NECT4_HUMAN
C:
[2-113]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GELETSDVVTVVL
G
Q
D
A
K
L
P
---
C
F
Y
-
R
G
---
D
S
G
E
-
Q
V
G
------------
Q
V
-
A
----------
W
-
A
R
V
----
D
-
A
G
----
E
G
A
---
Q
----
E
L
A
L
L
H
S
K
--
Y
G
---
L
------
H
V
-
S
P
A
Y
E
G
R
14
HHSearch
46.69
69%
-19
- C5 -
5EE7
-
GLR_HUMAN
A:
[197-220]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
L
R
N
A
-
K
L
K
------------
P
V
------------
Y
-
D
S
L
----
D
A
-------------------------------------------------
12
HHSearch
45.81
17%
-131
- C5 -
0.26
5JZS
-
HSAD_MYCTU
A:
[229-257]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-
I
----------
W
-
G
R
E
----
D
R
V
N
----
P
L
D
---
G
----
A
L
V
A
L
K
T
I
--
P
R
---
A
------
Q
L
-
H
V
-----
22
Fugue
44.40
18%
72
- C4 -
-
2D8V
-
A:
[1-67]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
S
G
S
S
G
---
L
P
W
-
C
C
I
-
C
N
E
D
A
-
T
L
R
CAGCDGDLYC--
A
R
-
C
----------
F
-
R
E
G
----
H
D
N
F
----
D
L
K
--------
E
H
Q
T
S
P
Y
H
--
P
R
---
R
------
P
C
-
Q
E
H
S
G
P
S
41
SP3
44.02
21%
52
* C6 *
-
1G7O
-
GLRX2_ECOLI
A:
[1-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
K
L
Y
I
Y
D
H
---
C
P
Y
-
C
L
K
-
A
R
M
I
F
-
G
L
K
NI----------
P
V
-
E
----------
L
-
H
V
L
----
L
N
D
D
----
A
E
T
P--
T
----
R
M
V
G
Q
K
Q
V
--
P
------------
I
-
L
Q
K
D
D
S
R
30
Fugue
42.04
25%
41
- C5 -
0.05
3HE4
-
?
B:
[1-44]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
T
V
K
E
L
K
---
N
Y
I
-
Q
E
L
-
E
E
R
N
A
-
E
L
K
------------
N
L
-
K
----------
E
-
H
L
K
----
F
A
K
A
----
E
L
E
---
F
----
E
L
A
A
H
K
F
E
------------------------
21
Fugue
41.10
18%
53
- C5 -
0.05
5LSI
-
DSN1_HUMAN
D:
[50-131]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GITELSRSISVDLA
E
S
K
R
L
G
C
---
L
L
L
-
S
S
F
-
Q
F
S
I
Q
-
K
L
E
------------
P
F
-
L
RDTKGFSLES
F
-
R
A
K
----
A
S
S
L
----
S
E
E
---
L
----
K
H
F
A
D
G
L
E
--
T
D
GTL
Q
------
K
C
-
F
E
D
S
N
G
-