@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SSFL02_115520T0_kcl26: (2019-03-29 )
PPSATEKCAYTIYRVASKNGLKALVREGDYIAYKNWDQEIHGVQVHFDGECNPKYKSDVYVF
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......--------..-----.10--...---..--....20-----------..--------..--..-.------------.-.30------------..-....-------..---40.-----....-.-..---50----.-.-.----.-..-----.---------.---------.60.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPS
A
T
E
--------
K
C
-----
A
Y
---
T
I
Y
---
R
V--ASKN
G
------------
L
K
--------
A
L
--
V
R-E------------G-
D
Y
I
------------
A
Y-KNWD-------QE---I
H
G
-----
V
Q
V
H
-F-DG---E-----C-N-P----K-YK-----S---------D---------VYVF
41
SP3
68.09
25%
75
* C8 *
-
1K3R
-
?
A:
[93-163]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHHPTGK
P
V
T
G
E
Y
--------
R
Q
-----
G
L
---
T
V
K
---
R
----
V
K
K
G
----------------------
T
L
--
V
D
-
I
------------
G
A
D
K
L
------------
A
L
-
C
R
E
K
LTV----
N
R
---
I
M
S
-----
F
R
V
V
-
R
-
L
G
KEI
L
-----
I
-
E
-
P
----
D
-
E
P
-----
E
---------
D
---------
R
Y
W
-
46
SP3
66.43
19%
15
- C8 -
-
1C4Q
-
STXB_BPH19
A:
[1-69]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
P
D
C
V
T
G
--------
K
V
-----
E
Y
---
T
K
Y
--------
N
D
D
D
------------
T
F
--------
T
V
--
K
V
-
G
------------
D
-
K
E
L
------------
A
T
-
N
R
A
N
LQSLLLS
A
Q
---
I
T
G
-----
M
T
V
T
-
I
K
T
N
---
A
-----
C
-
H
-
N
----
G
-
G
G
-----
F
---------
S
---------
E
V
I
F
43
SP3
63.88
27%
50
- C11 -
-
1QUB
-
APOH_HUMAN
A:
[244-319]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
C
K
V
P
V
--------
K
K
-----
A
T
---
V
V
Y
QGE
R
V
--
K
I
Q
E
K
------------
F
K
--------
N
G
--
M
L
-
H
------------
G
-
D
K
V
------------
S
F
-
F
C
K
N
-------
K
E
KKC
S
Y
T
-----
E
D
A
Q
C
I
-
D
G
---
T
-----
I
-
E
V
P
----
K
C
F
K
EHTDA
S
---------
D
---------
V
K
P
C
47
SP3
60.10
19%
57
* C11 *
-
1GHK
-
?
?:
[1-79]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIDIKAPTF
P
E
S
I
A
D
----------------
G
---
T
V
A
---
T
W
--
H
K
K
P
G
------------
E
A
------------
V
K
-
R
------------
D
-
E
L
I
------------
V
D
-
I
E
T
D
-------
K
V
---
V
M
E
-----
V
L
A
E
-
A
-
D
G
---
V
IAEIV
K
-
N
-
E
GDTV
L
-
S
G
-----
E
---------
L
---------
L
G
K
L
39
SP3
59.83
24%
-18
* C13 *
-
1WM2
-
SUMO2_HUMAN
A:
[12-89]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
E
--------
N
N
-----
D
H
---
I
N
L
---
K
V
--
A
G
Q
D
G
SVVQFKIKRHTP
L
S
--------
K
L
--
M
K
-------------------------------
A
Y
C
E
R
Q
G
-------
L
S
---
M
R
Q
-----
I
R
F
R
-
F
-
D
G
---
Q
-----
P
-
I
-
N
----
E
-
T
D
-----
T
PAQLEMEDE
D
T--------
I
D
V
F
36
Fugue
59.81
22%
-134
- C12 -
-
5TVO
1
?
B:
[1-59]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
E
G
P
E
--------
K
R
-----
L
E
---
V
I
M
---
R
V
--
V
D
G
T
H
------------
V
S
--------
G
L
--
L
A
-
H
------------
D
-----------------
D
-
D
V
W
Q
-------
K
V
---
I
D
A
-----
I
C
A
H
-
I
-
V
S
R--
E
-----
F
-
N
-
E
----
Y
-
I
R
-----
S
---------
Y
---------
V
L
S
E
38
Fugue
58.89
22%
-35
- C5 -
0.23
1PRT
-
TOX2_BORPE
B:
[4-89]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIVI
P
P
Q
E
Q
I
TQHGSPYG
R
C
ANKTR
A
L
---
T
V
A
---
E
L
--
R
G
S
G
D
------------
L
Q
--------
E
Y
--
L
R
-
H
VTRGWSIFALYD
G
-
T
Y
L
------------
G
-------------
G
E
---
Y
G
G
-----
V
I
K
D
-
G
-
T
P
---
G
-----
G
-
A
-
F
----
D
-
L
K
-----
T
---------
T
---------
F
C
I
M
42
SP3
57.99
32%
125
- C9 -
-
1H0Z
-
A:
[1-68]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESGK
A
T
S
Y
A
E
--------
L
C
-----
N
E
-----
Y
---
R
K
--
L
V
R
N
G
------------
K
L
--------
A
C
--
T
R
-
E
------------
N
-
D
P
I
---------------
Q
G
P
D
-------
G
K
---
V
H
G
NTCSM
C
E
V
F
-
F
-
Q
A
---
E
-----
E
-
E
-
E
----
K
-
K
K
-----
K
---------
E
---------
G
E
S
R
25
Fugue
56.70
27%
55
* C9 *
-
4RKN
10
MCCA_WOLSU
A:
[43-702]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQMTKEAREIIAHPKGTKESRGVISLQDYIVEEQAMYDWLFKNHPIFTKYGGKTVGKLVVKDRGEEWIEEGRGNDFSKAS
K
R
S
G
G
E
--------
G
F
-----
S
S
---
M
M
Y
---
R
V
--
A
R
N
S
T
------------
L
Q
YPNKFIGP
E
K
--
C
G
-
E
------------
C
-
H
P
A
------------
Q
Y
-
E
T
W
S
-------
R
S
---
R
H
A
-----
T
T
I
R
-
F
-
P
G
EHP
E
-----
V
-
N
-
N
----
K
-
L
N
-----
D
---------
P
---------
V
F
D
K
33
Fugue
52.59
16%
24
* C5 *
0.20
1E68
-
?
A:
[1-70]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MAK
E
F
G
I
P
A
--------
A
V
-----
A
G
---
T
V
L
---
N
V
--
V
E
A
G
G
WVTTI-------
V
S
--------
I
L
--
T
A
-
V
------------
G
-
S
G
G
------------
L
S
-
L
L
A
A
-------
A
G
---
R
E
S
-----
I
K
A
Y
-
L
-
K
K
---
E
-----
I
-
K
-
K
----
K
-
G
K
-----
R
---------
A
---------
V
I
A
W
37
Fugue
51.21
23%
90
- C5 -
0.25
4RU0
4
?
A:
[30-444]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
D
-
Q
Q
--------
F
F
-----
P
L
---
A
T
Y
---
R
V
GA
Y
A
S
S
G
------------
V
Q
--------
V
W
--
A
G
M
I
--------------
D
Y
L
------------
N
Y
-
I
N
Q
V
-------
E
G
G--
I
N
G
-----
V
K
L
V
-
W
-
Q
----
E
-----
C
-
E
-
T
----
E
-
W
T
-----
A
---------
E
---------
K
G
I
E
1
PsiBlast_PDB
48.99
33%
-207
- C3 -
-
1A45
-
CRGF_BOVIN
A:
[131-157]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
---
V
L
Y
---
E
M
--
T
N
Y
R
G
------------
R
Q
--------
Y
L
--
L
R
-
P
------------
G
-
D
Y
R
------------
R
Y
-
H
D
W
---------------------------------------------------------------------------------
44
SP3
47.59
11%
26
- C13 -
-
1Y8R
1
SUMO1_HUMAN
C:
[14-97]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
K
K
--------
E
G
-----
E
Y
---
I
K
L
---
K
V
--
I
G
Q
D
S
------------
S
E
--------
I
H
FK
V
K
-
M
------------
T
-
T
H
L
KKLKE-------
S
Y
C
Q
R
Q
G
-------
V
P
---
M
N
S
-----
L
R
F
L
-
F
-
E
G
---
Q
-----
R
I
A
-
D
----
N
-
H
T
-----
P
---------
K
ELGMEEEDV
I
E
V
Y
45
SP3
46.77
17%
180
- C8 -
-
1LVK
-
?
?:
[34-94]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIWY
N
P
D
P
K
E
--------
R
D
-----
S
Y
---
E
C
G
---
E
I
--
V
S
E
T
-------------------------------------------
S
-
D
S
F
------------
T
F
-
K
T
S
D
-------
G
Q
-----
D
-----
R
Q
V
K
-
K
-
D
----
D
-----
A
-
N
-
Q
-------------------------------------
27
Fugue
45.23
25%
48
* C12 *
-
5AZW
1
TMED2_HUMAN
A:
[2-95]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYFVS
I
D
A
H
A
E
--------
E
C
-----
F
F
---
E
R
V
---
T
S
--
G
T
K
M
G
------------
L
I
--------
F
E
--
V
A
-
E
------------
G
-
G
F
L
----------------
D
I
D
-------
V
E
---
I
T
G
-----
P
D
N
K
-
G
-
I
Y
---
K
-----
G
-
D
-
R
----
E
--
S
-----
S
---------
G
---------
K
Y
T
F
40
SP3
44.20
14%
124
- C11 -
-
1DD2
-
BCCP_PROFR
A:
[47-123]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG
K
A
G
E
G
E
--------
I
P
-----
A
P
LAG
T
V
S
---
K
I
--
L
V
K
E
G
------------
D
T
------------
V
K
-
A
------------
G
-
Q
T
V
------------
L
V
-
L
E
A
M
-------
K
M
---
E
T
E
-----
I
N
A
P
-
T
-
D
G
---
K
VEKVL
V
-
K
-
E
RDAV
Q
-
G
G
-----
Q
---------
G
---------
L
I
K
I
34
Fugue
43.75
23%
62
- C5 -
1R7L
-
?
A:
[-6-96]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AMK
P
R
D
I
N
K
--------
L
I
-----
A
S
---
K
I
F
---
G
Y
--
E
I
K
D
D
----------------------
N
I
--
I
K
-
D
------------
G
-
R
Y
R
LGIPLYSQNIES
A
W
-
Q
V
V
E
-------
K
L
---
E
Y
D
-----
V
K
V
T
-
K
-
T
D
---
L
-------
K
-
P
----
K
-
Y
Q
-----
V
---------
H
---------
V
F
V
P
21
HHSearch
43.47
10%
-217
* C6 *
-
2QKM
-
DCP1_SCHPO
G:
[89-118]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
-
V
------------
D
-
R
Y
L
------------
I
H
-
R
T
E
N
-------
Q
H
---
V
V
G
-----
L
W
M
F
-
D
-
P
N
---
D
-----
M
-
S
-
R
----
I
-
F
------------------------------
10
HHSearch
42.72
22%
-134
- C6 -
-
6AM0
-
?
F:
[144-175]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
V
-
R
------------
D
-
D
L
V
------------
M
I
-
K
T
L
K
-------
K
E
---
V
Y
G
-----
I
W
V
H
-
T
-
P
E
---
D
-----
R
-
Q
-
N
----
I
-
Y
E
-----------------------------
30
Fugue
42.38
12%
-38
- C5 -
0.14
4Q86
1
YCAO_ECOLI
A:
[2-583]
TQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSP
E
R
A
N
Y
Y
--------
R
C
-----
L
Q
---
T
L
L
---
L
L
--
A
Q
E
E
D
------------
R
Q
--------
P
L
--
Q
Y
-
L
------------
N
-
A
F
V
------------
R
M
-
Y
G
A
D
-------
A
V
---
E
A
A
-----
S
A
A
M
-
S
-
G
E
---
A
-----
A
-
F
-
Y
----
G
-
L
Q
PVD--
S
---------
D
---------
L
H
A
F