@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SSFL02_116450T0_kcl3: (2019-03-29 )
QWCIVTVFYQGRSTGETFPTAKKVGRKYEFPGEGKGYAPYKFVCDDQCNCVSAGRPFLTGMRLEGQ
Atome Classification :
(20 SA)
---------------------.........--10..----....-----.-.20...---...---..---30..-----....-..--40....-.---------...---50..--...---...60..-----...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------
Q
W
C
I
V
T
V
F
Y
--QGRS----TGET-----F-P
T
A
K
K
V---GRK---YE---FPGE-----GKGY-A
P
--
Y
K
F
VCD-D---------QCN---CVSA--GRP---
F
L
TGMRL-----EGQ
19
Fugue
66.25
22%
57
- C7 -
-
5A6W
4
?
C:
[11-93]
RAIDLSRERDPNFFDHPGIPV
P
E
C
F
W
F
M
F
K
--
N
N
---------
V
-----
R
-
Q
D
A
G
T
C
---
Y
S
S
---
W
K
---
M
D
M
K
V----
G
P
N
W
-
V
H
--
I
K
S
--
D
-
D
---------
N
C
N
----
L
S
G
--
D
F
P
PGW
I
V
L
G
K
K
R
-----
P
G
F
20
Fugue
60.23
16%
11
- C11 -
-
4EYT
-
?
A:
[10-106]
--------------------K
Q
N
C
L
I
K
I
I
N
IP
Q
G
T
L
----
K
A
E
V
-----
V
-
L
A
V
R
H
L
---
G
Y
E
---
F
Y
---
C
D
Y
I
-----
D
-
G
Q
-
A
M
--
I
R
F
Q
N
S
-
D
---------
E
Q
R
---
L
A
I
Q
--
K
L
L
---
N
H
N
N
N
K
L
-----
Q
I
E
1
PsiBlast_PDB
59.44
38%
-48
- C8 -
0.09
2GEQ
-
P53_MOUSE
A:
[126-164]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
3
PsiBlast_PDB
58.98
38%
-45
- C8 -
0.13
2IOM
-
P53_MOUSE
A:
[126-164]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
7
PsiBlast_PDB
58.52
38%
-57
- C8 -
0.18
1HU8
-
P53_MOUSE
A:
[119-157]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
4
PsiBlast_PDB
57.34
38%
-43
- C8 -
0.14
2IOO
-
P53_MOUSE
A:
[126-164]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
5
PsiBlast_PDB
57.14
38%
-26
- C8 -
0.20
3EXJ
-
P53_MOUSE
A:
[122-160]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
2
PsiBlast_PDB
56.96
38%
-21
- C8 -
0.18
2IOI
-
P53_MOUSE
A:
[126-164]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
6
PsiBlast_PDB
56.22
38%
-35
- C8 -
0.23
3EXL
-
P53_MOUSE
A:
[122-160]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
9
Fugue
55.96
28%
7
* C7 *
-
2LW6
-
?
A:
[19-98]
-------------------SF
V
Q
C
N
H
H
L
L
Y
--
N
G
R
H
----
W
G
T
I
-----
R
-
K
K
A
G
W
A
---
V
R
F
---
Y
E
E--
K
P
G
Q
-----
P
K
----
R
--
L
V
A
I
C
K
-
N
ASPVHCNYL
K
C
T
---
N
L
A
A
--
G
F
S
---
A
G
T
S
T
D
V
LSSGT
V
G
S
8
PsiBlast_PDB
55.30
38%
-84
- C8 -
0.23
2P52
-
P53_MOUSE
A:
[217-255]
------------------------------------------------------------------
Y
E
---
P
P
E
A
-----
G
S
E
Y
-
T
T
IH
Y
K
Y
M
C
N
-
S
---------
S
C
M
---
G
G
M
N
--
R
R
P
---
I
L
T
I
I
T
L
-----
E
--
26
SP3
53.96
19%
14
* C14 *
-
1NYP
-
A:
[1-66]
-----------------------------------------
G
S
M
-----
G
V
P
I
C
G
A
C
---
R
R
P
---
I
E
-----
G
R
VVNAM
G
K
Q
W
-
H
V
--
E
H
F
V
C
A
-
K
----------
C
E
---
K
P
F
L
--
G
H
R
---
H
---
Y
E
R
-----
K
G
L
11
Fugue
52.18
18%
55
- C13 -
-
1BF4
-
DN7D_SULAC
A:
[1-63]
-----------------------
A
T
V
K
F
K
Y
--
K
G
E
E
----
K
E
V
D
-----
I
-
S
K
I
K
K
V
---
W
R
V
GKM
I
S
---
F
T
Y
D
-----
E
G
G
G
-
K
T
--
G
R
G
A
V
S
-
E
---------
K
-------
D
A
--
P
K
E
---
L
L
Q
M
L
E
K
-----
Q
K
K
16
Fugue
50.88
15%
-118
- C11 -
-
2JX5
-
?
A:
[1-69]
---------------------
M
L
V
I
V
R
L
------------
Q
D
Q
T
-----
L
-
P
F
E
L
P
A
---
G
A
R
---
A
S
---
Q
L
S
N
-----
L
L
S
S
-
S
G
--
M
A
F
S
L
H
-
T
---------
Q
G
R
---
V
L
S
E
--
A
A
E
---
L
N
D
K
M
V
I
-----
D
A
F
33
SP3
50.69
21%
40
- C- -
-
1IGQ
-
KORB2_ECOLX
A:
[305-358]
---------------------
K
K
A
I
V
Q
V
E
H
--
D
E
R
P
ARLI
L
N
R
R
-----
P
-
P
A
E
G
Y
A
---
W
L
K
---
Y
E
---
D
D
G
Q
---------------
E
F
E
A
N
L
A
---------
D
V
K
---
L
V
A
----------
L
I
---------
E
G
-
34
SP3
50.00
21%
-14
* C9 *
-
1GYF
-
A:
[25-86]
------------------------
D
V
M
W
E
Y
--
K
W
E
N
----
T
G
D
A
ELYGP
F
-
T
S
A
Q
M
Q
----------
T
---
W
V
S
E
-----
G
--
Y
-
F
P
--
D
G
V
Y
C
R
-------------
K
---
L
D
P
P
--
G
G
Q
---
F
Y
N
S
K
R
I
-----
D
F
D
29
SP3
47.48
18%
87
- C7 -
-
1R8O
-
?
B:
[97-167]
----------------------
W
K
L
P
S
V
-
T
--
V
G
N
P
----
K
V
S
V
-----
F
-
G
G
P
F
K
I
EEG
K
S
G
---
Y
K
DVY
S
S
S
K
-----
G
R
D
L
-
D
---
D
G
I
E
V
N
-
K
---------
K
K
E
KRL
V
V
K
D
--
G
N
P
---
F
I
I
R
F
K
K
-----
S
G
-
24
Fugue
44.07
19%
-30
- C9 -
-
4Y0L
-
A:
[1-88]
---------------------
P
V
Q
V
L
V
R
F
D
--
A
G
G
A
----
S
A
P
E
-----
H
-
S
Q
T
I
A
A
---
I
R
H
---
R
I
---
A
Q
A
P
-----
N
V
V
S
V
A
P
--
P
R
F
A
D
D
-
N
---------
G
S
A
---
L
L
S
A
VL
A
R
D
---
T
I
T
W
M
R
T
-----
Q
L
P
27
SP3
43.19
16%
17
- C7 -
-
1FBR
-
?
?:
[1-46]
--------------------A
E
K
C
-----
F
--
D
-
H
A
----
A
G
T
S
-----
Y
-----
V
V
---
G
E
T
---
W
E
---
K
P
Y
Q
-----
G
W
-------
M
M
V
D
C
------------
T
C
L
---
G
E
G
S
--
G
R
--------
I
T
C
-----
T
S
R
25
SP3
42.95
18%
55
- C9 -
-
1QBJ
-
DSRAD_HUMAN
A:
[6-70]
--------------SIYQDQE
Q
--
R
I
L
K
F
L
--
E
E
L
G
----
E
G
K
A
-----
T
--
T
A
H
D
L
---
S
G
K
---
L
G
---
T
P
K
K
-----
E
I
N
R
-
V
L
--
Y
S
L
A
-
K
-
K
---------
G
K
L
---
Q
K
E
A
--
G
T
P
---
P
L
W
K
I
A
---------