@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SSFL14_3_117560T0_kcl67: (2019-03-29 )
NFCAYYIKTLEGWELVGWVKIGGQDELTWKGDSIGVKAEDTDCKVVLVNGQ
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------.......---..10-..-.-.-.-...----.20...--..--...-30--------.----.-......-.-40.--.....---..50
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------N
F
C
A
Y
Y
I
---
K
TL--EG-
W
-
E
-
L
-
V
G
W
----
V
K
IGGQ--D
E
--
L
T
W-K---------G----D-SIGVKA-E-DT
D
--
C
K
V
V
L
---VNGQ
38
Fugue
83.32
39%
-7
- C7 -
0.65
2MYW
-
?
A:
[7-85]
----------------------------------------------------------------SGRENLYFQGHMAAPA
R
F
C
V
Y
Y
D
---
G
H
L
--
P
A
T
R
-
V
-
L
-
L
M
Y
----
V
R
I
G
T
T
--
A
T
--
I
T
A
-
R
---------
G
----
H
-
E
F
E
V
E
A
-
K
-
D
Q
N
--
C
K
V
I
L
---
T
N
G
K
1
PsiBlast_PDB
75.82
38%
8
- C7 -
0.53
2MYW
-
?
A:
[23-74]
--------------------------------------------------------------------------------
R
F
C
V
Y
Y
D
---
G
H
L
--
P
A
-
T
-
R
V
L
-
L
M
Y
----
V
R
I
G
T
T
--
A
T
--
I
T
A
-
R
---------
G
----
H
-
E
F
E
V
E
A
-
K
-
D
Q
N
--
C
K
V
I
L
---
T
N
G
K
5
HHSearch
75.25
39%
44
- C7 -
0.56
2N37
-
?
A:
[4-55]
--------------------------------------------------------------------------------
R
F
C
V
Y
Y
D
---
G
H
L
--
P
A
-
T
R
V
-
L
-
L
M
Y
----
V
R
I
G
T
T
--
A
T
--
I
T
A
-
R
---------
G
----
H
-
E
F
E
V
E
A
-
K
-
D
Q
N
--
C
K
V
I
L
---
T
N
G
K
2
PsiBlast_PDB
73.67
38%
45
- C7 -
0.59
2N37
-
?
A:
[4-55]
--------------------------------------------------------------------------------
R
F
C
V
Y
Y
D
---
G
H
L
--
P
A
-
T
-
R
V
L
-
L
M
Y
----
V
R
I
G
T
T
--
A
T
--
I
T
A
-
R
---------
G
----
H
-
E
F
E
V
E
A
-
K
-
D
Q
N
--
C
K
V
I
L
---
T
N
G
K
3
PsiBlast_PDB
71.41
38%
35
- C7 -
0.46
5JHJ
-
?
A:
[37-86]
----------------------------------------------------------------------------------
C
V
Y
Y
D
---
G
H
L
--
P
A
-
T
-
R
V
L
-
L
M
Y
----
V
R
I
G
N
T
--
A
T
--
I
T
A
-
R
---------
G
----
H
-
E
F
E
V
E
A
-
K
-
D
Q
N
--
C
K
V
I
L
---
T
N
G
K
32
SP3
56.22
25%
77
- C7 -
0.33
1C0M
-
POL_RSVP
A:
[217-269]
-----------------------------------------------------------------------------VLT
E
G
P
P
V
K
I
---
R
I
E
--
T
G
---
E
-
W
-
E
K
G
----
W
N
V
---------
L
V
W
-
G
---------
R
----
G
-
Y
A
A
V
K
N
-
R
-
D
T
D
---
K
V
I
W
---
V
P
S
R
51
Fugue
56.08
25%
-35
* C7 *
0.44
5LOP
-
?
C:
[3-64]
--------------------------------------------------------------------------------
N
F
K
G
Y
Q
I
---
E
I
E
LK
D
G
-
K
-
R
-
I
-
T
G
T
----
L
K
Q
V
S
P
--
K
S
--
L
T
L
-
T
DAVFQDGGV
S
----
P
-
V
F
K
I
K
A
-
D
-
K
L
Y
--
D
L
K
V
L
---
K
L
P
P
40
Fugue
55.19
29%
-33
- C7 -
0.35
5LLJ
-
POL_VILVK
A:
[2-58]
--------------------------------------------------------------------------------
K
I
R
F
C
Y
Y
---
R
T
R
--
K
R
-
G
-
H
-
P
-
G
E
W
----
Q
---
G
P
--
T
Q
--
V
L
W
-
G
---------
G
----
D
G
A
I
V
V
K
D
-
R
-
G
T
D
--
R
Y
L
V
I
---
A
N
K
D
52
Fugue
51.90
25%
-28
- C6 -
-
3G8Q
-
CDAT8_METKA
A:
[1-278]
----------------MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTA
R
P
C
L
Y
C
A
---
R
E
L
--
A
E
-
A
-
G
-
V
-
A
G
V
----
V
Y
L
G
------------
R
---------
G
----
R
-
G
L
G
P
Y
Y
L
A
-
R
S
G
--
V
E
V
V
E
---
V
H
P
D
50
Fugue
51.34
32%
36
- C7 -
0.30
1WQS
2
?
A:
[1-173]
APPTLWSRVVRFGSGWGFWVSPTVFITTTHVIPTGVREFFGEPIESIAIHRAGEFTQFRFSRKVRPDLTGMVLEEGCPEG
V
V
C
S
I
L
I
---
K
R
D
--
S
G
-
E
-
L
-
L
-
P
L
A
----
V
R
M
G
A
I
--
A
S
--
M
K
I
-
Q
---------
G
----
R
-------------------
L
---
V
H
G
Q
29
SP3
51.06
21%
-80
- C7 -
0.38
1GCQ
1
GRB2_HUMAN
A:
[2-57]
-----------------------------------------------------------------------------------
S
T
Y
V
---
Q
A
L
--
F
D
-
F
-
D
------------
P
Q
E
D
--
G
E
--
L
G
F
R
R
---------
G
----
D
-
F
I
H
V
M
D
-
N
S
D
P
N
--
W
W
K
G
A
---
C
H
G
Q
31
SP3
48.21
19%
20
- C7 -
0.36
1F1S
-
HYSA_STRA3
A:
[920-984]
-------------------------------------------------------------------------------S
K
Q
Q
V
I
Y
D
---
K
N
S
--
Q
T
-
W
-
A
-
V
-
I
K
H
DNQE
S
L
I
N
N
Q
--
F
K
--
M
N
--
K
---------
A
----
G
-
L
Y
L
V
Q
K
-
V
-
G
N
D
--
Y
Q
N
V
Y
---
Y
Q
P
Q
4
PsiBlast_PDB
46.42
61%
-153
- C5 -
-
3N05
-
?
A:
[221-259]
-----------------------------------------------------------------------------------------------------------------
I
G
G
Q
--
D
E
--
L
V
F
-
D
---------
G
----
D
-
S
I
V
V
-----
D
R
D
--
G
E
V
V
--------
33
SP3
45.15
25%
-62
- C7 -
-0.05
1EX4
2
?
A:
[174-221]
---------------------------------------------------------------------------------
F
R
V
Y
Y
------
R
--
D
S
-
R
-
N
-
S
-
L
-
W
----
K
G
P
A
-----
K
--
L
L
W
-
K
---------
G
----
E
-
G
A
V
V
I
Q
-
D
-
N
S
D
--
I
K
V
V
P
---
R
R
K
A
36
SP3
42.59
21%
101
- C7 -
-
1LVK
-
?
?:
[34-94]
----------------------------------------------------------------------------------
Y
I
W
Y
N
PDP
K
E
R
--
D
S
-
Y
-
E
-
C
-
G
E
I
----
V
S
E
-
T
S
--
D
S
--
F
T
F
-
K
TSD------
G
----
Q
-
D
R
Q
V
K
K
-
D
-
D
A
N
--
Q
-----------
28
SP3
40.96
17%
98
- C7 -
0.41
1CKA
-
A:
[1-57]
-----------------------------------------------------------------------------------
A
E
Y
V
---
R
A
L
--
F
D
-
F
-
N
--------------
G
N
DE
E
D
--
L
P
F
K
K
---------
G
----
D
-
I
L
R
I
R
D
-
K
-
P
E
E
QW
W
N
A
E
D
---
S
E
G
K
14
HHSearch
37.94
25%
-271
* C8 *
-
3C0D
-
?
A:
[5-28]
---------------------------------------------------------------------------------------------------------
T
K
----
V
K
L
C
Q
L
--
D
D
--
L
M
--
P
---------
F
----
I
-
G
A
T
V
L
I
-
E
-
G
E
---------------
34
SP3
37.16
15%
28
- C7 -
0.12
1KNA
-
HP1_DROME
A:
[16-67]
-------------------------------------------------------------------------------------------
E
Y
--
A
V
-
E
-
K
-
I
-
I
D
R
----
R
V
R
K
G
M
--
V
E
YY
L
K
W
-
K
---------
G
YPET
E
-
N
T
W
E
P
E
-
N
-
N
L
D
--
C
Q
D
L
I
QQY
E
A
S
R
37
SP3
36.57
21%
87
- C7 -
0.14
1GJW
-
?
A:
[573-636]
------------------------------------------------------------------------GKFENLTT
K
D
L
V
M
Y
S
---
Y
E
K
--
N
G
-
Q
-
K
-
I
-
V
I
A
----
A
N
V
G
K
E
--
P
K
--
E
I
T
-
G
---------
G
----
R
-
V
W
N
G
K
W
-
S
-
D
E
E
---
K
V
V
L
---
K
P
L
E
42
Fugue
36.17
15%
-
- C6 -
-
5ABV
-
MXT_DROME
B:
[579-638]
---------------------------------------------------------------------------VSYDI
E
H
L
L
Y
Y
S
---
M
S
P
--
H
S
-
W
-
T
-
L
P
T
D
W
----
Q
K
M
Q
E
T
--
A
P
--
S
I
L
-
R
---------
N
----
K
-
D
L
Q
D
E
S
-
Q
-
R
F
D
--
G
D
K
Y
L
---
A
S
I
K