@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SV9610_035030T: (2019-03-29 )
QDLRRPLLCDVYIEYPSGQVFDQALGHDIVPAGETAEISGFKCKTVRGTCVILPTCDTPPEYRVTS
Atome Classification :
(20 SA)
--------------------------------......-...10.----...---------------------.-------...-20.....--..-----.---------30.--...---.-..---.-40---.-....------...---------------------.50.....--..----..60.-.--.--...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------QDLRR
P
-
L
L
C
D
V
Y
----
I
EY---------------------P-------S
G
Q
-
V
F
D
Q
A
LG--HD-----I---------VPA--GET---A-EI---S-G----
F
-
K
C
K
T------VR
G
---------------------
T
C
-
V
I
L
PT--CD----TPP-E-Y--R--VTS
24
Fugue
67.20
23%
37
- C12 -
-
2MYW
-
?
A:
[7-85]
---------------------------------
S
G
R
E
N
-
L
Y
F
Q
G
H
----
M
A
A
---------------------
P
ARFCVYY
D
G
H
-
L
P
A
T
R
V
L
--
L
M
-----
Y
---------
V
R
I
--
G
T
T
---
A
-
T
I
---
T
-
A
RGHE
F
-
E
V
E
A
------
K
D
Q
---------------------
N
C
K
V
I
L
T
N
--
G
K
----
Q
A
P
-
D
-
W
--
L
--
A
A
E
38
SP3
65.04
27%
15
* C7 *
-
1CZP
1
FER1_NOSSO
A:
[1-98]
-------------------------ATFKVTL
I
N
E
A
E
G
---
T
K
H
E
----
I
E
V
---------------------
P
-------
D
D
E
Y
I
L
D
A
A
E
E
--
Q
G
-----
Y
D--------
L
P
F
--
S
C
R
---
A
-
G
A
---
C
-
S
----
T
C
A
G
K
L
------
V
S
G
TVDQSDQSFLDDDQIEAGYVL
T
C
-
V
A
Y
P
T
--
S
D
VVIQ
T
H
K
-
E
-
E
--
D
--
L
Y
-
25
Fugue
65.02
20%
48
* C9 *
-
1AON
-
CH10_ECOLI
O:
[1-97]
---------------------------------
M
N
I
R
P
-
L
H
D
R
V
I
----
V
K
R
KEVETKSAGGIVLTGSAAAKS
T
-------
R
G
E
-
V
L
A
V
G
N
G
--
R
I
-----
L
ENGEVKPLD
V
K
V
--
G
D
I
---
V
-
I
F
NDG
Y
-
G
----
V
-
K
S
E
K
------
I
D
N
---------------------
E
E
-
V
L
I
M
S
---
E
----
S
D
I
-
L
-
A
--
I
--
V
E
A
14
Fugue
64.01
26%
-86
- C9 -
-
4AUQ
-
BIRC7_HUMAN
B:
[6-62]
------------------------------QL
R
R
L
Q
E
E
-
R
T
C
K
V
C
----
L
D
R
---------------------
A
-------
V
S
I
-
V
F
V
P
C
-
G
--
H
L
-----
V
---------
C
A
-------------------------
E
C
A
P
------
G
L
Q
---------------------
L
C
----
P
I
--
C
R
----
A
P
V
-
R
-
S
--
R
--
V
R
T
21
Fugue
60.18
18%
10
- C7 -
-
2WBX
-
CAD23_MOUSE
A:
[1-102]
---------------------MQVNRLPFFTN
H
F
F
D
T
Y
-
L
L
I
S
E
------
D
T
---------------------
P
-------
V
G
S
-
S
V
T
Q
L
L
A
--
R
D
-----
M
---------
D
N
D
--
P
L
V
---
F
-
G
V
---
S
-
G
----
E
-
E
A
S
R
FFAVEP
D
T
G
---------------------
V
V
-
W
L
R
Q
P
--
L
D
----
R
E
T
-
K
-
S
--
E
--
F
T
V
37
SP3
59.31
22%
7
- C10 -
-
1G3S
-
DTXR_CORDI
A:
[148-225]
-------------------------PGTRVID
A
A
T
S
M
P
-
R
K
V
R
I
V
QINE
I
F
Q
---------------------
V
-------
E
T
D
-
Q
F
T
Q
L
L
D
--
A
D
-----
I
----------
R
V
--
G
S
E
---
V
-
E
I
---
V
-
D
----
H
-
I
T
L
S
------
H
N
G
---------------------
K
D
-
V
E
L
-
L
--
D
D
----
L
A
H
-
T
-
I
--
R
--
I
E
E
31
SP3
54.23
18%
-38
- C9 -
-
1S24
-
A:
[32-87]
---------------------------------
A
Y
L
K
--
W
I
C
I
T
-------------------------------------
C
G
H
-
I
Y
D
E
A
L
G
DE
A
E
-----
G
---------
F
T
P
--
G
T
R
F--
E
-
D
I
---
P
D
D
----
W
-
C
C
--------------------------------------
P
D
--
C
G
----
A
T
K
E
D
-
Y
--
V
--
L
Y
E
20
Fugue
52.87
16%
-12
- C8 -
0.17
1GZS
-
SOPE_SALTM
B:
[1-165]
GSLTNKVVKDFMLQTLNDIDIRGSASKDPAYA
S
Q
T
R
E
A
-
I
L
S
A
V
Y
----
S
K
N
---------------------
K
-------
D
Q
C
-
C
N
L
L
I
S
K
--
G
I
NIAPF
L
---------
Q
E
I
--
G
E
A
---
A
-
K
N
---
A
-
G
----
L
-
P
G
T
T
------
K
N
D
---------------------
V
F
-
T
P
S
G
A
--
G
A
----
N
P
F
-
I
-
T
--
P
--
L
I
S
7
HHSearch
51.86
27%
73
- C8 -
0.15
2UX9
4
DODEC_THET8
A:
[14-59]
---------------------------------------------------------------------------------
S
E
E
-
G
L
E
A
A
I
Q
--
A
A
-----
L
---------
A
R
A
--
R
K
T
---
L
R
H
L
---
D
-
W
----
F
-
E
V
K
E
------
I
R
G
---------------------
T
I
-
G
------
E
A
----
G
V
K
-
E
-
Y
--
Q
--
V
V
-
35
SP3
51.25
21%
-2
- C12 -
-
1ELV
-
A:
[2-91]
--------------------------------
L
D
C
G
I
P
E
S
I
E
N
G
K
----
V
E
D
---------------------
P
-------
E
S
T
-
L
F
----
G
--
S
V
-----
I
RYTC-----
E
E
P
--
Y
Y
Y
---
M
-
E
G
---
G
-
G
E---
Y
-
H
C
-
A
------
G
N
G
---------------------
S
W
-
V
N
E
V
L
--
G
P
----
E
L
P
-
K
C
V
--
P
--
V
--
32
SP3
50.92
18%
-67
* C12 *
-
1GOI
2
CHIB_SERMA
A:
[447-498]
-----------------------------------
N
L
P
-
I
M
--
T
A
----
P
A
Y
---------------------
V
-------
P
G
T
-
T
Y
A
Q
---------------------------
G
A
L
---
V
-
S
Y
---
Q
-
G
----
Y
-
V
W
Q
T
------
K
W
G
---------------------
Y
I
-
T
S
A
P
G
--
S
D
----
S
A
W
-
L
-
K
VG
R
--
V
--
39
SP3
50.70
15%
8
- C10 -
-
1JJC
-
SYFB_THET8
B:
[400-474]
----------------------------------
P
P
E
A
-
I
P
F
R
P
---------------------------------------
E
-
Y
A
N
R
L
L
G
--
T
S
-----
Y
----------
P
E
--
A
E
Q
---
I
-
A
I
LKR
L
-
G
----
C
-
R
V
E
G
------
E
G
P
---------------------
T
Y
-
R
V
T
-----------
P
P
-
S
-
H
--
R
LD
L
R
L
18
Fugue
50.32
15%
-88
- C8 -
0.03
2MPN
-
YGAP_ECOLI
A:
[106-173]
--------------------------------
K
S
Q
P
L
P
-
L
M
R
Q
V
Q
----
I
A
A
---------------------
G
-------
G
L
I
-
L
I
G
V
V
L
G
--
Y
T
-----
V
---------
N
S
G
--
F
F
L
LSG
F
-
V
G
---
A
-
G
----
L
-
L
F
A
G
------
I
S
G
---------------------
F
S
-
G
M
A
R
L
--
L
D
----
K
M
P
-
W
-
N
--
Q
--
R
A
-
36
SP3
49.96
21%
-40
* C10 *
-
1ISU
1
HIP2_RHOTE
A:
[1-62]
-----------------------------GTN
A
A
M
R
K
A
-
F
---
N
Y
----
Q
D
T
---------------------
A
K------
N
G
K
---
K
C
S
G
C
--
A
Q
-----
F
---------
V
P
G
--
A
S
P
---
T
-
A
A
---
G
-
G
-------
C
K
V
------
I
P
G
---------------------
D
N
-
Q
I
A
P
G
GY
C
D
----
A
-----
F
--
I
--
V
K
K
33
SP3
48.83
19%
71
- C9 -
-
4HTC
-
HIRV2_HIRME
I:
[1-65]
-------------------------------------------------
I
T
Y
TDCT-----------------
E
-------
S
G
Q
-
N
L
C
L
C
E
G
--
S
N
-----
V
---------
C
G
K
--
G
N
K
---
C
-
I
L
---
G
-
G
----
N
-
Q
C
V
T
------
G
E
G
---------------------
T
P
-
K
--
P
E
--
S
H
----
N
N
G
-
D
-
F
--
E
--
E
I
P
34
SP3
47.68
16%
-54
- C7 -
-
2PSP
-
TFF2_PIG
A:
[2-53]
------------------------------------
K
P
-
A
A
C
R
C
S
----
R
Q
D
---------------------
P
-------
K
N
R
-
V
---------
N
-----
C
---------
G
F
P
--
G
I
T
---
S
-
D
-------------
Q
C
F
T
-------
S
G
---------------------
C
C
-
F
D
S
Q
V
--
P
G
----
V
P
W
-
C
-
F
--
K
--
P
L
P
12
HHSearch
47.25
27%
-268
- C3 -
-
3H3E
-
?
A:
[243-266]
----------------------------------------------------------------------------------
V
D
-
I
F
K
R
E
F
L
--
G
K
-----
I
MD-------
C
Y
A
--
G
L
K
---
L
-
E
V
---
S
-------------------------------------------------------------------------
5
HHSearch
46.49
26%
-78
- C4 -
-
3CBN
-
?
A:
[29-66]
----------------------------------------------------------------------------------------
R
A
R
G
--
H
P
-----
N
---------
V
T
A
GH
R
T
T
---
F
-
E
V
---
T
-
V
----
D
-
P
E
I
G
------
E
T
A
---------------------
D
C
-
I
I
G
V
S
--
S
S
-------------------
15
Fugue
44.79
20%
122
- C8 -
-0.06
2KK9
-
A:
[1-55]
--------------------------------
K
G
L
R
R
D
-
L
---------------------------------
D
-------
A
S
R
-
E
A
K
K
Q
L
E
--
A
E
-----
Q
---------
Q
K
L
--
E
E
Q
---
N
-
K
I
---
S
-
E
----
A
-
S
R
K
G
------
L
R
R
---------------------
D
L
-
D
A
S
R
E
--
A
K
----
K
Q
V
-
E
-
K
--
A
-----
17
Fugue
42.21
18%
-72
- C8 -
-0.02
1X9B
-
?
A:
[1-53]
--------------------------------
R
N
L
S
D
R
-
A
K
F
E
S
M
----
I
N
S
---------------------
P
-------
S
K
S
-
V
F
V
R
N
L
N
--
E
L
-----
E
---------
A
L
A
--
V
R
L
-------------------------------
G
---------------------
K
S
-
Y
R
I
Q
L
--
D
Q
----
A
K
E
-
K
-
W
--
K
--
V
K
-