@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SV9623_117180T0_kcl13: (2019-03-29 )
KDCIIQRYKDGDVNNMYTANRNEEITIEEYKVFVNEACHSYPVILPDRSVLSGD
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..---.-----.-.....-----10..--------...-----...20---.---------.-...------..----.----.30--------.......------.------.-----------40----.----------..--------....--..----50------------.-------...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KD---C-----
I
-
I
Q
RYK-----DGDV--------NNM-----YTAN----R---------N-
E
E
I
------
T
I
----
E
----
E
Y
---------
K
V
F
V
N
E
A
------
C
------H-----------S-----Y----------
P
V
--------ILPD--RS----V-------------L-------SGD
5
HHSearch
90.74
96%
-113
- C4 -
0.40
5ZNG
-
?
C:
[4-57]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
---
C
-----
I
-
I
Q
R
Y
K
-----
D
G
D
V
--------
N
N
I
-----
Y
T
A
N
----
R
---------
N
-
E
E
I
------
T
I
----
E
----
E
Y
---------
K
V
F
V
N
E
A
------
C
------
H
-----------
P
-----
Y
----------
P
V
--------
I
L
P
D
--
R
S
----
V
-------------
L
-------
S
G
D
2
PsiBlast_PDB
90.74
96%
-113
- C4 -
0.40
5ZNG
-
?
C:
[4-57]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
---
C
-----
I
-
I
Q
R
Y
K
-----
D
G
D
V
--------
N
N
I
-----
Y
T
A
N
----
R
---------
N
-
E
E
I
------
T
I
----
E
----
E
Y
---------
K
V
F
V
N
E
A
------
C
------
H
-----------
P
-----
Y
----------
P
V
--------
I
L
P
D
--
R
S
----
V
-------------
L
-------
S
G
D
6
HHSearch
81.96
96%
-87
- C4 -
0.29
2MYV
-
?
A:
[24-77]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
---
C
-----
I
-
I
Q
R
Y
K
-----
D
G
D
V
--------
N
N
I
-----
Y
T
A
N
----
R
---------
N
-
E
E
I
------
T
I
----
E
----
E
Y
---------
K
V
F
V
N
E
A
------
C
------
H
-----------
P
-----
Y
----------
P
V
--------
I
L
P
D
--
R
S
----
V
-------------
L
-------
S
G
D
1
PsiBlast_PDB
81.96
96%
-87
- C4 -
0.29
2MYV
-
?
A:
[24-77]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
D
---
C
-----
I
-
I
Q
R
Y
K
-----
D
G
D
V
--------
N
N
I
-----
Y
T
A
N
----
R
---------
N
-
E
E
I
------
T
I
----
E
----
E
Y
---------
K
V
F
V
N
E
A
------
C
------
H
-----------
P
-----
Y
----------
P
V
--------
I
L
P
D
--
R
S
----
V
-------------
L
-------
S
G
D
29
Fugue
46.96
12%
14
- C4 -
0.27
5A6W
4
?
C:
[11-93]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPV
P
E
---
C
-----
F
-
W
F
M
F
K
-----
N
N
V
R
--------
Q
D
A
-----
G
T
C
Y
----
S
---------
S
-
W
K
M
------
D
M
----
K
VGPN
W
V
---------
H
I
K
S
D
D
N
------
C
------
N
-----------
L
-----
S
----------
G
D
--------
F
P
P
G
--
W
I
----
V
-------------
L
-------
G
K
K
36
Fugue
45.77
13%
-89
- C5 -
-
1OWT
-
A4_HUMAN
A:
[124-189]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
------------
A
L
L
V
-----
P
D
K
C
--------
K
F
L
-----
H
Q
E
R
----
M
---------
D
-
V
C
E
------
T
H
----
L
----
H
W
---------
H
T
V
A
K
E
T
------
C
------
S
-----------
E
-----
K
----------
S
T
--------
N
L
H
D
--
Y
G
----
M
-------------
L
-------
L
P
C
3
PsiBlast_PDB
45.26
30%
-147
- C5 -
-
4U4P
-
SMC4_HUMAN
B:
[601-646]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
A
-----
I
-
I
Q
E
K
K
-----
S
G
R
I
--------
P
G
I
-----
Y
G
R
L
----
G
---------
D
-
L
G
A
------
I
D
----
E
----
K
Y
---------
D
V
A
I
S
S
C
------
C
------
H
-----------
A
-----
L
----------
D
Y
--------
I
V
V
D
---------------------------------
26
Fugue
43.14
24%
-83
- C4 -
0.24
4J0D
4
?
A:
[22-491]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMSNRLIFDA
D
W
---
L
-----
V
-
P
E
Q
V
Q
-----
V
A
G
Q
--------
A
I
Q
-----
Y
Y
A
A
----
R
---------
N
-
I
Q
Y
VQHPVA
A
I
----
Q
----
V
L
---------
N
V
F
V
P
A
A
------
Y
------
L
HGSSVNGYQRA
T
-----
A
----------
P
I
--------
L
M
P
N
TV
G
G
----
Y
-------------
L
-------
P
G
P
25
Fugue
42.84
18%
22
* C5 *
-
5JRT
-
TNKS2_HUMAN
A:
[11-74]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
D
F
---
S
-----
I
-
T
Q
F
V
R
-----
N
L
G
L
--------
E
H
L
-----
M
D
I
F
----
E
---------
R
-
E
Q
I
------
T
L
----
R
----
V
L
VEMGHKELK
E
I
G
I
N
A
Y
------
G
------
H
-----------
R
-----
E
----------
K
L
--------
I
K
G
V
--
E
R
----
L
-------------
I
-------
S
G
Q
49
SP3
41.25
16%
-35
- C- -
-
1JVP
1
CDK2_HUMAN
P:
[1-298]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRVPSTAIREISLLKELNHPNIVKLLDVIHT
E
N
KL-
Y
-----
L
-
V
F
E
F
L
-----
H
Q
D
L
--------
K
K
F
-----
M
D
A
S
----
A
---------
L
-
T
G
I
------
P
L
----
P
----
L
I
---------
K
S
Y
L
F
Q
L
LQGLAF
C
------
H
-----------
S
-----
H
----------
R
V
--------
L
H
R
D
--
L
K
PQNL
L
-------------
I
-------
N
T
E
42
SP3
40.68
22%
48
- C4 -
0.39
1BKZ
-
LEG7_HUMAN
A:
[1-135]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLD
T
S
---
E
-----
V
-
V
F
N
S
K
-----
E
Q
G
S
WGREERGP
G
V
P
-----
F
Q
R
G
----
Q
---------
P
-
F
E
V
------
L
I
IASD
D
----
G
F
---------
K
A
V
V
G
D
A
Q-----
Y
------
H
-----------
H
-----
F
----------
R
H
--------
R
L
P
L
--
A
R
----
V
RLVE---------
V
-------
G
G
D
45
SP3
40.58
22%
67
- C2 -
-
1IJY
-
FZD8_MOUSE
A:
[5-126]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAC
Q
E
---
I
-----
T
-
V
P
L
C
K
-----
G
I
G
Y
--------
E
Y
T
-----
Y
M
P
N
QFNH
D
---------
T
Q
D
E
A
GL----
E
V
----
H
----
Q
F
---------
W
P
L
V
E
I
Q
------
C
------
S
-----------
P
-----
D
LKFFLCSMYT
P
I
CLEDYKKP
L
P
P
C
--
R
S
----
V
CERAKAGCAPLMR
Q
-------
Y
G
F
44
SP3
39.99
12%
-10
- C5 -
-
1QFE
1
AROD_SALTI
A:
[1-252]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTVTVKNLIIGEGMPKIIVSLMG
R
D
---
I
NSVKA
E
-
A
L
A
Y
R
-----
E
A
T
F
--------
D
I
L
EWRVD
H
F
M
D
----
I
---------
A
-
S
T
Q
------
S
V
----
L
----
T
A
---------
A
R
V
I
R
D
A
------
M
------
P
-----------
D
-----
I
----------
P
L
--------
L
F
T
F
--
R
S
----
A
-------------
K
-------
E
G
G
4
PsiBlast_PDB
38.60
28%
-149
- C5 -
-
3L51
-
B:
[5-50]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
---
A
-----
I
-
I
Q
E
K
K
-----
S
G
R
I
--------
P
G
I
-----
Y
G
R
L
----
G
---------
D
-
L
G
A
------
I
D
----
E
----
K
Y
---------
D
I
A
I
S
S
C
------
C
------
H
-----------
A
-----
L
----------
D
Y
--------
I
V
V
D
---------------------------------
41
SP3
37.09
16%
-4
* C4 *
0.18
1G86
2
LEG10_HUMAN
A:
[2-142]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLLPVPYTEAASLSTGSTVTIKGRPLVCFLNEPYLQVDFHTEMKEESDIVFHFQVCF
G
R
---
R
-----
V
-
V
M
N
S
R
-----
E
Y
G
A
WKQQVESK
N
M
P
-----
F
Q
D
G
----
Q
---------
E
-
F
E
L
------
S
I
SVLP
D
----
K
Y
---------
Q
V
M
V
N
G
Q
S-----
S
------
Y
-----------
T
-----
F
----------
D
H
--------
R
I
K
P
--
E
A
----
V
KMVQ---------
V
-------
W
R
D
35
Fugue
36.26
31%
22
- C5 -
-
5DBJ
1
?
D:
[5-441]
SDHDYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFEREHVGESLVPATTPVLLEIGVMEKIEKANFPKKFGAAWTSADSGPEDKMGFQGLDHDFRSAEILFNERKQEGVDRDFTFHVDRGKFDRILLEHAGSLGAKVFQGVEIADVEFLSPGNVIVNAKLGKRSVEIKAKMVVDASGRNVLLGRRLGLREKDPVFNQFAIHSWFDNFDRKSATQSPDKVDYIFIHFLPMTNTWVWQIPITETITSVGVVTQKQNYTNSDLTYEEFF
W
E
---
A
-----
V
-
K
T
R
-------------------
E
N
L
-----
H
D
A
L
----
K
---------
A
-----------
S
----
E
----
Q
V
---------
R
P
F
K
K
E
A
------
D
------
Y
-----------
S
-----
Y
----------
G
M
KE------
V
C
G
D
--
S
F
----
V
-------------
L
-------
I
G
D
32
Fugue
35.15
28%
-3
- C4 -
0.07
2OVS
1
?
A:
[1-118]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLVPRGSMIMKDGIYSIIFISNEDSCGEGILI
K
N
---
G
-----
N
M
I
---
T
-----
G
G
D
I
--------
A
S
V
-----
Y
Q
G
V
----
L
---------
S
-
E
D
-------------
E
----
D
I
---------
I
L
H
V
H
R
Y
------
N
------
Y
-----------
E
-----
I
----------
P
----------------
S
----
V
-------------
L
-------
N
I
E
43
SP3
33.26
18%
8
- C5 -
-
1C0P
2
OXDA_RHOTO
A:
[196-290]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AEPIRGQTVLVKSPCKRCTMDSSD
P
A
SPA
Y
-----
I
-
I
P
R
-
P
-----
G
G
E
V
IC------
G
G
T
-----
Y
G
V
G
----
D
W--------
D
-
L
S
V
------
N
P
----
E
----
T
V
---------
Q
R
I
L
K
H
C
------
L
------
R
-----------
L
-----
D
----------
P
T
--------
I
S
S
D
--
G
T
----
I
-------------
E
-------
G
I
E
27
Fugue
30.86
21%
43
- C4 -
0.19
2LWL
-
D106A_HUMAN
A:
[1-45]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FFD
E
K
---
C
-----
N
-
K
L
K
--------
G
T
C
--------
K
N
N
-----
C
G
K
N
-------------------------------
E
----
E
L
---------
I
A
L
C
Q
K
S
------
L
------
K
-----------
C
-----
C
----------
R
T
--------
I
Q
P
S
--
G
S
----
I
-------------
I
-------
D
--
50
SP3
30.53
20%
49
- C5 -
-
1LUF
-
MUSK_RAT
A:
[560-860]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNPKLLSLEYP
R
N
---
N
-----
I
-
E
Y
V
R
D
IGEGA
F
G
R
V
FQARA---
P
G
L
-----
L
P
Y
E
----
P
FTMVAVKML
K
-
E
E
A
------
S
A
----
D
----
M
Q
---------
A
D
F
Q
R
E
A
------
A
LMAEFD
N
-----------
P
NIVKL
L
----------
G
V
--------
C
A
V
G
--
K
P
----
M
-------------
C
LLFEYMA
Y
G
D