@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : TH0016_037160T0_kcl16: (2019-03-29 )
GSAWFPGDPTYDCGISIFRPPKPGSRSRNGALAEVIYVNRGETFKIIEGRYTCSIEQNCERPDCNLPRTWNYRGQ
Atome Classification :
(20 SA)
------.........10......-..20.--...-..------..30........40..----.----....-.50.......----.60.-.-..-----.----..-.70....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------GSAWFPGDPTYDCGI
S
I
-FRPPK--PGS-RS------RNG
A
L
A
E
V
I
Y
VNRG
E
T
----
F
----
K
I
IE-
G
R
Y
T
C
SIEQN----CERP-D-CN-----L----PR-TWNYRGQ
8
HHSearch
70.10
39%
-0
* C18 *
-
3JWD
4
?
A:
[156-216]
-----------------------------------
L
L
------
L
N
G
S
L
A
E
E
E
V
V
I
R
S
V
N
FTDN
A
----
K
T
I
I
-
V
Q
L
N
T
S
V
E
I
N
----
C
T
G
A
G
H
-
C
N
-----
I
----
A
R
A
K
W
N
----
9
HHSearch
67.29
39%
28
- C18 -
-
3DNO
-
?
E:
[259-339]
-----------------------------------
L
L
------
L
N
G
S
L
A
E
E
E
V
V
I
R
S
V
N
FTDN
A
----
K
T
I
I
-
V
Q
L
N
T
S
V
E
I
N
----
C
T
G
A
-
G
H
C
N
-----
I
----
S
R
A
K
W
N
----
11
HHSearch
66.18
39%
12
- C18 -
-
2NY1
5
?
A:
[113-176]
-----------------------------------
L
L
------
L
N
G
S
L
A
E
E
E
V
V
I
R
S
V
N
FTDN
A
----
K
T
I
I
-
V
Q
L
N
T
S
V
E
I
N
----
C
T
G
A
G
H
-
C
N
-----
I
----
A
R
A
K
W
N
----
4
PsiBlast_PDB
65.53
32%
21
- C15 -
-
4MBT
-
?
A:
[9-66]
------------------
C
T
Y
T
V
-
W
A
A
A
S
--
P
G
G
G
R
R
------
L
D
S
G
Q
S
W
T
I
T
V
N
P
G
T
T
----
N
----
A
R
I
W
-
G
R
T
S
C
T
F
D
A
N
GRGK
C
E
T
G
-
D
-
C
N
--------------------
13
HHSearch
63.49
44%
-21
- C18 -
-
2QAD
7
?
A:
[99-143]
------------------------------------
L
------
L
N
G
S
L
A
E
E
E
I
V
I
R
S
E
N
----
F
TNNA
K
T
I
I
-
V
Q
L
N
E
S
V
V
I
N
----
C
T
R
P
-
N
-
N
N
--------------------
3
PsiBlast_PDB
63.43
32%
21
- C15 -
-
4L5H
1
?
A:
[9-66]
------------------
C
T
Y
T
V
-
W
A
A
A
S
--
P
G
G
G
R
R
------
L
D
S
G
Q
S
W
T
I
T
V
N
P
G
T
T
----
N
----
A
R
I
W
-
G
R
T
S
C
T
F
D
A
N
GRGK
C
E
T
G
-
D
-
C
N
--------------------
19
HHSearch
59.81
43%
-21
- C18 -
-
3J70
-
?
U:
[259-302]
-----------------------------------
L
L
------
L
N
G
S
L
A
E
E
E
V
V
I
R
S
V
N
----
F
TDNA
K
T
I
I
-
V
Q
L
N
T
S
V
E
I
N
----
C
T
R
P
-
N
-
N
N
--------------------
1
PsiBlast_PDB
57.43
36%
-10
- C14 -
0.15
4UYB
-
S14L3_HUMAN
A:
[314-357]
-----------------
D
I
G
F
G
V
-
F
L
K
T
K
--
M
G
E
-
R
Q
------
R
A
G
E
M
T
E
V
L
P
S
Q
R
Y
N
A
----
H
----
M
V
P
E
D
G
N
L
T
C
S
-------------------------------------
17
HHSearch
57.20
35%
-4
- C18 -
-
5V7J
7
?
G:
[228-281]
-----------------------------------
L
L
------
L
N
G
S
L
A
E
E
E
V
M
I
R
S
E
N
----
I
ANNA
K
N
I
L
-
V
Q
F
N
T
P
V
Q
I
N
----
C
T
R
P
-
N
-
N
N
--------------------
2
PsiBlast_PDB
57.14
38%
13
- C14 -
0.19
1OLM
-
S14L2_HUMAN
E:
[313-356]
-----------------
D
V
G
F
G
I
-
F
L
K
K
K
--
M
G
E
-
R
Q
------
R
A
G
E
M
T
E
V
L
P
N
Q
R
Y
N
S
----
H
----
L
V
P
E
D
G
T
L
T
C
S
-------------------------------------
42
SP3
55.91
20%
55
- C13 -
-
1UOY
-
BUBL_PENBR
A:
[1-64]
--------------
D
T
C
G
S
G
Y
N
V
D
Q
R
R
T
N
--
S
G
C
-
K
A
------
G
N
G
D
-
R
H
F
C
G
C
D
R
T
G
V
----
V
----
E
C
K
G
-
G
K
W
T
E
V
--
Q
D
----
C
G
S
S
-
S
-
C
K
-----------
G
-
T
S
N
--
G
G
35
SP3
55.08
22%
39
- C9 -
-
1FVL
-
?
?:
[1-70]
GEECDC
G
S
---
P
S
N
P
C
C
D
A
--
A
T
-
C
K
-
L
R
--
P
G
A
-
Q
C
------
A
D
G
L
C
C
--------
D
Q
----
C
----
R
F
K
K
-
K
R
T
I
C
R
I
A
R
G
----
D
F
P
D
-
D
R
C
T
GLSND
C
----
P
R
--
W
N
D
L
--
6
PsiBlast_PDB
53.25
38%
-15
- C14 -
0.10
1O6U
-
S14L2_HUMAN
A:
[313-356]
-----------------
D
V
G
F
G
I
-
F
L
K
------
E
-
R
Q
------
R
A
G
E
M
T
E
V
L
P
N
Q
R
Y
N
S
----
H
----
L
V
P
E
D
G
T
L
T
C
S
-------------------------------------
58
Fugue
52.87
17%
41
- C13 -
-
5A6W
4
?
C:
[11-93]
----------
R
A
I
D
L
S
R
E
R
D
P
N
F
-
F
D
H
P
G
--
I
P
V
-
P
E
CFWFMF
K
N
N
V
R
Q
D
A
G
T
C
Y
S
S
W
K
----
M
----
D
M
K
V
-
G
P
N
W
V
H
I
K
S
D
-------
D
-
N
-
C
N
-----
L
SGDF
P
P
-
G
W
I
V
L
G
K
5
PsiBlast_PDB
50.38
25%
0
- C- -
-
2B25
-
TR61B_HUMAN
A:
[210-306]
-------------------------------------------
K
H
G
G
V
C
A
V
Y
V
V
N
I
T
Q
V
----
I
----
E
L
L
D
-
G
I
R
T
C
E
L
A
L
S
----
C
E
K
I
-
S
-
E
V
-----
I
----
V
R
-
D
W
-----
41
SP3
46.82
18%
53
* C13 *
-
1GOI
2
CHIB_SERMA
A:
[447-498]
-------------------
N
L
P
I
-
M
T
A
P
A
YV
P
G
T
-
T
Y
------
A
Q
G
A
L
V
S
Y
----
Q
G
Y
V
----
W
----
Q
T
K
W
-
G
-
Y
I
T
S
A
----------
P
-
G
-
S
D
-----------
S
-
A
W
L
K
V
G
R
56
Fugue
46.47
28%
-127
- C14 -
0.10
3TT8
-
A:
[1-21]
------------------------------------------------------------------------------
G
I
V
E
Q
----
C
C
T
S
-
I
-
C
S
-----
L
----
Y
Q
-
L
E
N
Y
C
N
-
46
Fugue
46.08
28%
-127
- C14 -
0.14
5E7W
-
A:
[1-21]
------------------------------------------------------------------------------
G
I
V
E
Q
----
C
C
T
S
-
I
-
C
S
-----
L
----
Y
Q
-
L
E
N
Y
C
N
-
57
Fugue
45.76
28%
-123
- C14 -
0.11
4FKA
-
?
A:
[1-21]
------------------------------------------------------------------------------
G
I
V
E
Q
----
C
C
T
S
-
I
-
C
S
-----
L
----
Y
Q
-
L
E
N
Y
C
N
-
47
Fugue
45.38
28%
-106
- C14 -
0.12
3W7Y
-
?
A:
[1-21]
------------------------------------------------------------------------------
G
I
V
E
Q
----
C
C
T
S
-
I
-
C
S
-----
L
----
Y
Q
-
L
E
N
Y
C
N
-