@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Z2_1_075850T0_kcl2: (2019-03-29 )
AAAFGPLTRIDKPFTQYRITYTAPNKKPVVNKLGYGNTAKLSVDGITYTAVADAKCKFVIVGSPWPAGHFTVGQV
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......-...10----------.-----------..-...-.---..20.--------.-----.----....--.30...--.---.---.------.--------.40-------..--..--..----...50.-..----.-------..---------..60--------....-------...-------..70....--------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAFGP-LTRI-----------D-----------KP-F
T
Q
-
Y
---
R
I
T
Y
T--------A-----P----NKKP--
V
V
NKLG--Y---G---N------
T
--------
A
K
--------
L
S
--VD--
G
I
----
T
Y
T
A
VA-DA----
K
-------
C
K
---------
F
V
I
---------VGSP-------WPA-------G
H
F
TVGQV--------------------------------------------------------------------------------
37
Fugue
61.39
15%
75
- C7 -
0.42
5A6W
4
?
C:
[11-93]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAID
L
S
R
E
R
D
-
P
N
F
F
-----------
D
-----------
H
P
-
G
I
P
-
V
---
P
E
C
F
W
--------
F
-----
M
----
F
K
N
N
--
V
R
Q
D
A
G
--
T
C
Y
S
S
---
W
------
K
--------
M
D
--------
M
K
--
V
G
--
P
N
----
W
V
H
I
K
S
-
D
D
----
N
-------
C
N
---------------------
L
S
G
D
-------
F
P
P
-------
G
W
I
V
L
G
K
K
R
PGF----------------------------------------------------------------------------
25
Fugue
58.92
14%
-17
- C7 -
0.63
2MYW
-
?
A:
[7-85]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SG
R
E
N
L
Y
F
-
Q
G
H
M
-----------
A
-----------
A
P
--
A
R
-
F
---
C
V
Y
Y
D
GH------
L
-----
P
----
A
T
R
V
--
L
L
M
Y
V
R
--
I
---
G
---
T
------
T
--------
A
T
--------
I
T
--
A
R
--
G
H
----
E
F
E
V
E
A
K
D
Q
----
N
-------
C
K
---------
V
I
L
---------
T
N
G
K
-------
Q
A
P
-------
D
W
L
A
A
E
P
Y
--------------------------------------------------------------------------------
30
Fugue
56.70
18%
15
- C7 -
0.43
1WK0
-
A:
[1-137]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGSSGD
E
E
T
K
A
F
E
A
L
L
S
NIV
K
P
V
A
S
DIQAR
T
V
V
L
T
W
S
P
P
S
S
L
I
N
G
E
-
T
D
E
S
-----------
S
-----------
V
P
E
L
Y
G
-
Y
---
E
V
L
I
S
--------
S
-----
T
----
G
K
D
G
--
K
Y
K
S
V
Y
--
V
---
G
---
E
------
E
--------
T
N
--------
I
T
--
L
N
--
D
L
KPA
M
D
Y
H
A
K
V
-
Q
A
----
E
-------
Y
N
---------
S
-
I
---------
K
G
T
P
-------
S
E
A
-------
E
I
F
T
T
L
S
C
EPDIPNPPRISGPSSG----------------------------------------------------------------
38
Fugue
56.10
21%
29
- C6 -
-
5E9P
-
?
A:
[1-86]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
G
E
-
Y
T
E
I
-----------
A
-----------
L
P
-
F
S
Y
-
D
G
A
G
E
Y
Y
W
K
--------
T
-----
D
QFST
D
P
N
D
--
W
S
R
Y
V
N
--
S
---
W
---
N
------
L
--------
D
L
--------
L
E
--
I
N
--
G
T
----
D
Y
T
N
V
W
-
V
A
----
Q
-------
H
Q
I
P
A
A
SDG
Y
W
Y
I
H
---------
Y
K
S
G
-------
V
S
W
-------
G
H
V
E
I
K
----------------------------------------------------------------------------------
50
SP3
55.85
21%
-16
- C9 -
-
1Q7S
-
PTH2_HUMAN
A:
[63-179]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
E
Y
K
M
I
L
V
V
R
NDLKMG
K
G
K
V
A
A
Q
C
S
H
A
A
V
S
A
Y
K
Q
I
Q
R
R
N
P
E
M
L
K
Q
-----------
W
-----------
E
Y
-
C
G
Q
-
P
---
K
V
V
V
K
--------
A
-----
P
----
D
E
E
T
---
L
I
A
L
------------------
L
--------
A
H
--------
A
K
--
M
L
--
G
L
----
T
V
S
L
I
Q
-
D
A
----
G
RTQIAPG
S
Q
---------
T
V
L
---------
G
I
G
P
-------
G
P
A
D
L
I
D
K
V
T
G
H
L
K
L
Y
----------------------------------------------------------------------------------
42
SP3
54.21
20%
66
- C7 -
1OAC
-
AMO_ECOLI
A:
[91-183]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KR
P
H
P
L
N
A
-
L
T
A
D
E
I
K
Q
A
V
E
I
V
K
A
S
-----------
A
D
-
F
K
P
N
T
---
R
F
T
E
I
--------
S
L
LP--
P
----
D
K
E
A
--
V
W
A
F
A
L
--
E
---
N
---
K
PVDQ
P
R
K
--------
A
D
--------
V
I
--
M
L
DG
K
H
----
I
I
E
A
V
V
-
D
L
----
Q
-------
N
N
---------
K
L
L
---------
S
W
Q
P
-------
I
K
D
-------
A
H
---
G
----------------------------------------------------------------------------------
28
Fugue
53.87
22%
40
- C5 -
-
4UQU
10
?
A:
[1-462]
AEKEKN
A
A
E
I
R
Q
Q
F
AMTAGSP
I
I
V
N
DKLERYAEVRTAFTHPTSF
F
K
P
N
YKGEVKP
W
F
L
S
A
Y
D
E
K
V
R
Q
I
E
N
GENGPKMKAKN
V
G
E
A
R
A
G
R
A
L
E
A
A
G
W
T
LDINYGNIYPNRFFMLWSGETM
T
N
T
Q
L
W
APVGLDRRPPDTTD
P
V
E
L
T
N
Y
V
K
F
A
A
R
M
A
GAD
L
V
G
V
A
R
LNRNWVYS
E
A
V
T
I
PADVPYEQSLH
K
E
I
E
K
P
I
V
F
K
DVP
L
P
I
E
T
DDELIIPNTCE
N
V
I
V
A
G
I
A
M
N
R
E
M
M
Q
T
APN
S
M
A
C
A
T
T
A
F
C
Y
S
R
M
C
M
F
D
M
W
L
C
Q
F
I
R
Y
M
G
Y
Y
A
I
P
S
CNGVGQ
S
V
A
F
A
V
E
A
GL
G
Q
A
S
RMGACI
T
P
E
F
G
P
-
N
V
R
L
-----------
T
-----------
K
V
-
F
T
N
-
M
---
P
L
V
----------------
P
----
D
K
P
I
--
D
F
G
V
T
E
--
F
---
C
---
E
------
T
--------
C
K
--------
K
C
--
A
R
--
E
C
----
P
S
K
A
I
T
-
E
G
----
P
-------
R
T
---------
F
--------------
E
-------
G
R
S
-------
I
H
N
Q
S
G
K
L
QWQND
Y
N
K
C
L
G
Y
W
P
E
S
GGYCG
V
C
V
A
V
CPFTKGNIWIHDGV
E
W
L
I
DNTRN
I
T
E
V
W
D
G
KINTYGLDADHFRDTVSFRKDRVK
41
SP3
52.98
16%
-2
* C7 *
1KSI
-
AMO_PEA
A:
[1-91]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
Q
H
P
L
D
P
-
L
T
K
E
-----------
E
F
L
A
V
Q
T
I
V
Q
N
K
Y
P
-
I
S
N
-
N
---
R
L
A
F
H
--------
Y
I
G
L
DD
P
----
E
K
D
H
--
V
L
R
Y
E
T
--
H
---
P
---
T
------
L
V
S
I
P
R
K
I
F
V
V
--------
A
I
--
I
N
--
S
Q
----
T
H
E
I
L
I
-
N
L
----
R
-------
I
R
----------
S
I
---------
V
S
D
N
-------
I
H
N
-------
G
Y
--------------------------------------------------------------------------------------
1
PsiBlast_PDB
52.79
40%
0
- C- -
-
5VK2
-
?
E:
[71-100]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
---
N
------
T
--------
A
S
--------
L
T
--
I
S
--
G
L
----
Q
A
E
D
E
A
-
D
Y
----
Y
-------
C
N
---------
S
Y
S
---------
I
H
S
P
-------
W
-------------------------------------------------------------------------------------------------
43
SP3
47.19
22%
13
- C7 -
0.28
1WI9
-
A:
[98-169]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GS
S
G
S
S
G
F
-
L
T
E
F
-----------------------------------
I
N
Y
I
--------
K
-----
K
----
S
K
V
V
--
L
L
E
D
L
A
F
Q
M
---
G
---
L
------
R
--------
T
Q
D
A
I
N
R
I
Q
D
L
L
--
T
E
--
G
-----
T
L
T
G
V
I
-
D
D
----
R
-------
G
K
---------
F
I
Y
---------
I
T
P
S
-------
G
P
S
-------
S
G
--------------------------------------------------------------------------------------
3
PsiBlast_PDB
44.12
30%
-61
* C12 *
-
2XZL
2
NAM7_YEAST
A:
[267-322]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Y
-
I
V
R
L
-----------
P
-----------
N
----
D
-
T
---
F
T
L
E
L
--------
K
-----
P
----
S
K
T
P
--
P
P
T
H
L
T
--
T
---
G
---
F
------
T
--------
A
E
--------
F
I
--
W
K
--
G
T
----
S
Y
D
R
M
Q
-
D
A
----
L
-------
K
K
---------
F
A
I
----------------------------------------------------------------------------------------------------------------------
31
Fugue
43.89
21%
11
* C11 *
-
5LSI
-
NSL1_HUMAN
E:
[1-76]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
P
-
L
G
S
S
-----------
A
-----------
T
P
-
R
E
D
-
F
---
R
V
R
C
T
SKRAVTEM
L
-----
Q
----
L
C
G
R
--
F
V
Q
K
L
G
--
D
---
A
LPE
E
------
I
--------
R
E
--------
P
A
--
L
R
--
D
A
----
Q
W
T
F
E
S
-
A
V
----
Q
-------
E
N
---------
I
S
I
---------
N
G
Q
A
-------
W
Q
E
-------
A
S
--------------------------------------------------------------------------------------
29
Fugue
42.31
13%
-44
- C7 -
0.36
2JGR
1
YEGS_ECOLI
A:
[4-299]
----------------------------------------------------------------------------------------------------------------------------------------------------------------F
P
A
S
L
L
I
L
N
GKSTDN
L
P
L
R
E
A
I
M
L
L
R
E
E
G
M
T
I
H
V
R
V
T
WEKG
D
A
A
R
Y
V
E
E
A
R
K
F
GVA
T
V
I
A
GGG
D
G
T
I
N
E
V
S
T
A
L
I
Q
CEGDD
I
P
A
L
G
I
L
PLGTAN
D
F
A
T
S
V
GIPEA
L
D
K
A
L
K
L
A
I
AGD
A
I
A
I
D
M
A
Q
V
NKQTCFI
N
M
A
T
G
G
F
G
T
-
I
H
G
L
M----------
R
M----------
D
T
-
L
Q
P
-
D
---
R
C
E
I
R
--------
G
-----
E
----
N
F
H
W
Q
G
D
A
L
V
I
G
--
I
---
G
---
N
------
G
--------
R
Q
--------
A
G
GG
Q
Q
--
L
C
----
P
N
A
L
I
N
-
D
G
----
L
-------
L
Q
---------
L
R
I
---------
F
T
G
D
-------
N
P
N
-------
I
I
E
G
A
S
S
W
F
D
I
Q
A
P
H
D
I
T
F
N
L
DG
E
P
L
S
G
Q
N
F
H
I
E
I
LPAALRCRLPPDCPLLR------------------------------------
11
HHSearch
39.29
27%
-39
- C14 -
-
5I0Y
-
?
A:
[54-90]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
N
K
N
G
--
F
---
G
---
A
------
G
--------
E
W
--------
I
P
--
Y
L
--
T
I
----
S
Y
T
L
V
N
-
N
D
----
T
--------
G
---------
E
K
Q
---------
E
G
T
F
-------
M
P
M
-----------------------------------------------------------------------------------------------
10
HHSearch
38.79
27%
-38
- C14 -
-
5I0Y
-
?
B:
[54-90]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
N
K
N
G
--
F
---
G
---
A
------
G
--------
E
W
--------
I
P
--
Y
L
--
T
I
----
S
Y
T
L
V
N
-
N
D
----
T
--------
G
---------
E
K
Q
---------
E
G
T
F
-------
M
P
M
-----------------------------------------------------------------------------------------------
2
PsiBlast_PDB
38.68
40%
-306
* C10 *
-
5N4J
-
?
L:
[70-99]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
---
N
------
T
--------
A
S
--------
L
T
--
I
S
--
G
L
----
Q
A
E
D
E
A
-
D
Y
----
Y
-------
C
S
---------
L
Y
I
---------
S
S
S
T
-------
W
-------------------------------------------------------------------------------------------------
27
Fugue
38.61
24%
11
- C7 -
2WGO
-
?
A:
[-1-96]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLILDGDL
L
K
D
K
L
K
-
L
P
V
I
-----------
D
-----------
N
L
-
F
G
K
-
E
---
L
L
D
K
F
--------
Q
-----
D
----
D
I
K
D
--
K
Y
G
V
D
T
--
K
---
D
L--
K
------
I
--------
L
K
--------
T
S
--
E
D
--
K
R
----
F
Y
Y
V
S
V
-
D
A
GDGE
K
-------
C
K
---------
F
K
I
RKDVDVPKM
V
G
R
K
-------
C
R
K
-------
D
D
D
D
D
D
G
Y
--------------------------------------------------------------------------------
45
SP3
38.59
13%
-14
- C7 -
1A2V
-
AMO_PICAN
A:
[1-96]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PARP
A
H
P
L
D
P
-
L
S
T
A
E
I
K
A
A
T
N
T
V
K
S
Y
-----------
F
A
-
G
K
K
-
I
---
S
F
N
T
V
--------
T
L
RE--
P
----
A
R
K
A
--
Y
I
Q
W
K
E
--
Q
---
G
---
G
------
P
LPPR
L
A
Y
-
Y
V
--------
I
L
--
E
A
--
G
K
P
G
--
V
K
E
G
L
V
-
D
L
----
A
-------
S
L
---------
S
V
I
---------
E
T
R
A
-------
L
E
T
-------
V
Q
P
I
------------------------------------------------------------------------------------
36
Fugue
37.78
16%
-20
- C7 -
0.40
5EZU
1
A46_VACCW
A:
[7-82]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
F
D
I
-
S
V
N
A
-----------
S
-----------
K
T
-
I
N
A
-
L
---
V
Y
F
S
T
--------
Q
-----
Q
----
N
K
L
V
--
I
R
N
E
V
N
D-
T
---
H
---
Y
------
T
--------
V
E
--------
F
D
--
R
D
--
K
V
V
D
--
T
F
I
S
Y
N
-
R
H
----
N
-------
D
T
---------
I
E
I
---------
R
G
V
L
-------
P
E
E
-------
T
N
I
G
C
A
V
---------------------------------------------------------------------------------
26
Fugue
37.62
16%
-66
- C4 -
-
2CME
1
ORF9B_CVHSA
A:
[1-78]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
P
P
-
A
L
H
L
-----------
V
-----------
D
P
-
Q
I
Q
-
L
---
T
I
T
A
D
--------------
P
----
K
V
Y
P
--
I
I
L
R
L
G
--
S
---
N
---
L
------
S
--------
L
S
--------
M
A
--
R
R
--
N
L
----
D
S
L
E
A
R
-
A
F
----
Q
-------
S
T
---------
P
I
V
---------
V
Q
M
T
K
L
ATTEE
L
P
D
-------
E
F
V
V
V
T
A
K
--------------------------------------------------------------------------------