@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Z2_1_117080T0_kcl47: (2019-03-29 )
RCNVKIYNDKGKYQGQASDDWGETLTIRGYTCYTDSYCKASCDGLPAGWTAEGT
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..-.......------10......--..-20.----.......-----.30....-----.-...40---------.---..----...-..50.---...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RC-
N
V
K
I
YND------KGKYQGQA--SD-D-W----G
E
T
L
T
I
R
-----
G
Y
T
C
YTD-----S-
Y
C
KAS---------C---DG----LPA-GWT-A---EGT
29
SP3
71.98
29%
13
- C6 -
0.03
1CSK
-
CSK_HUMAN
A:
[11-68]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT
E
C
--
I
A
K
Y
N
----------
F
H
G
T
A
--
E
Q
-
D
-
L
PFCK
G
D
V
L
T
I
V
-----
A
V
T
-
K
D
P
-----
N
-
W
Y
K
A
K
---------
N
K--
V
G
REGI
I
P
A
-
N
Y
V
-
Q
---
K
R
-
40
Fugue
68.09
20%
-82
- C6 -
0.33
2MM2
-
?
A:
[1-65]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
-
T
A
N
I
L
N
I
------
N
E
V
V
I
A
T
G
--
C
V
-
P
-
A
----
G
G
N
L
I
I
R
VGSDH
S
Y
L
I
R
A
T
-----
V
-
S
C
G
L
S
---------
L
NPS
Q
S
----
F
I
N
-
G
E
S
-
L
---
A
S
G
25
SP3
64.24
29%
24
- C6 -
-
1AIW
-
?
?:
[1-62]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MG
D
C
A
N
A
N
V
Y
P
N
WVS---
K
D
W
A
G
G
Q
P
--
T
H
N
E
-
A
----
G
Q
S
I
V
Y
K
-----
G
-
N
L
Y
T
A
-----
N
-
W
Y
T
A
S
---------
V
---
P
G
----
S
D
S
-
S
W
T
-
Q
---
V
G
S
41
Fugue
61.15
28%
-115
- C7 -
-
5K47
3
PKD2_HUMAN
A:
[30-519]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REKYLKSVLRELVTYLLFLIVLCILTYGMMSSNVYYYTRMMSQLFLDTPVSKTEKTNFKTLSSMEDFWKFTEGSLLDGLYWKMQPDNRSFIFYENLLLGVPRIRQLRVRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPFGPR
N
G
-
T
A
W
I
Y
T
S
------
E
K
D
L
N
G
----
S
S
-
H
-
W
----
G
I
I
A
T
Y
S
-----
G
A
G
Y
Y
L
D
LSRTR
E
-
E
T
A
A
Q
---------
V
---
A
S
----
L
K
K
N
V
W
L
-
D
---
R
G
T
34
Fugue
58.02
23%
-37
- C3 -
-
3WUW
3
KI3L1_HUMAN
G:
[16-301]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPFLSAWPSAVVPRGGHVTLRCHYRHRFNNFMLYKED
R
I
-
H
I
P
I
F
H
G
------
R
I
F
Q
E
S
F
N
--
M
S
-
P
---------
V
T
T
A
-----
H
A
G
N
Y
T
---------
C
R
G
S
---------
H
---
P
H
----
S
P
T
-
G
W
S
-
A
---
P
S
N
37
Fugue
57.36
24%
58
* C6 *
0.22
5A6W
4
?
C:
[11-93]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSRERDPNFFDHPGIPVPECFWFMFKNNV
R
Q
-
D
A
G
T
C
Y
S
------
S
W
K
M
D
M
K
V
--
G
P
---------
N
W
V
H
I
K
-----
S
-----
D
-----
D
-
N
C
N
L
S
---------
G
---
D
-----
F
P
P
-
G
W
I
-
V
---
L
G
K
33
Fugue
57.34
24%
-7
- C6 -
0.20
2LW6
-
?
A:
[19-98]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFV
Q
C
-
N
H
H
L
L
Y
N
-------
G
R
H
W
G
T
I
--
R
K
-
K
-
A
----
G
W
A
V
R
F
Y
EEKP-
G
Q
P
K
R
L
V
-----
A
-
I
C
K
N
A
SPVHCNYLK
C
---
T
N
----
L
A
A
-
G
F
S
-
A
---
G
T
S
24
SP3
56.98
20%
-41
- C6 -
0.13
1GOI
2
CHIB_SERMA
A:
[447-498]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
P
I
M
T
A
------
P
-
A
Y
V
P
G
T
--
T
Y
-
A
-
Q
----
G
A
L
V
S
Y
Q
-----
G
Y
V
W
Q
T
K
-----
W
-
G
Y
I
T
S
---------
A
---
P
G
----
S
D
S
-
A
W
L
-
K
---
V
G
R
48
Fugue
54.71
27%
11
- C7 -
-
4MT5
-
?
A:
[0-183]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQ
T
A
-
Y
V
K
Y
V
D
D
------
T
T
------------------
G
E
T
L
R
Q
D
-----
D
L
H
G
Y
T
D
-----
E
-
T
I
P
Y
S
---------
T
---
A
E
----
G
I
K
-
K
Y
E
-
G
---
D
G
Y
32
SP3
54.10
16%
41
- C6 -
0.22
1YCS
-
B:
[167-229]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IMN
K
G
-
V
I
Y
A
L
W
D
---------
Y
E
P
Q
N
--
D
D
-
E
-
L
PMKE
G
D
C
M
T
I
I
-----
H
R
E
D
E
D
E
-----
I
E
W
W
W
A
R
---------
L
---
N
D
KEGY
V
P
R
-
N
L
L
-
G
---
L
Y
P
30
SP3
45.48
14%
32
- C6 -
0.06
1BBZ
-
ABL1_HUMAN
A:
[1-58]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
F
V
A
------
L
Y
D
F
V
A
S
G
--
D
N
-
T
-
L
SITK
G
E
K
L
R
V
L
-----
G
Y
-
N
H
N
G
-----
E
-
W
C
E
A
Q
---------
T
---
K
N
GQGW
V
P
S
-
N
Y
I
-
T
---
P
V
N
1
PsiBlast_PDB
44.45
42%
126
* C11 *
-
1KZQ
-
P30_TOXGO
A:
[190-222]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
-
N
E
K
S
F
K
D
ILPKLT
E
N
P
W
Q
G
N
A
--
S
S
-
D
-
K
----
G
A
T
L
T
I
K
----------------------------------------------------------
18
HHSearch
43.29
40%
-138
- C8 -
-
1H9H
-
ITR2_ECBEL
I:
[8-27]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
C
K
Q
D
-----
S
-
D
C
L
A
G
---------
C
---
V
C
----
G
P
N
-
G
F
C
--------
39
Fugue
43.24
15%
14
- C6 -
0.29
2JN4
-
?
A:
[1-66]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVMIRKTATGH
S
A
-
Y
V
A
K
K
D
L
------
E
E
L
I
V
E
M
E
--
N
P
-
A
L
W
----
G
G
K
V
T
L
A
N----
G
W
Q
L
E
L
P
-----
A
-
M
A
A
D
T
--------------
P
----
L
P
I
-
T
V
E
-
A
---
R
K
L
28
SP3
43.05
9%
81
- C6 -
0.11
1K4U
-
NCF2_HUMAN
S:
[455-516]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q
L
K
-
K
G
S
Q
V
E
A
------
L
F
S
Y
E
A
T
Q
--
P
E
-
D
-
L
EFQE
G
D
I
I
L
V
L
-----
S
K
V
--
N
E
-----
E
-
W
L
E
G
E
---------
S
---
K
G
KVGI
F
P
K
-
V
F
V
-
E
---
D
S
A
31
SP3
42.91
24%
77
- C6 -
-
1YUA
-
?
?:
[66-122]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
------
K
L
R
Y
L
A
D
A
PQ
Q
D
-
P
-
E
----
G
N
K
T
M
V
R
-----
F
S
R
K
T
K
Q
-----
Q
-
Y
V
S
S
E
---------
K
---
D
G
----
K
A
T
-
G
W
S
-
A
FYV
D
G
K
47
Fugue
42.88
20%
59
- C6 -
0.23
4YMP
2
?
A:
[12-130]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VF
D
A
-
V
I
K
A
Y
K
D
------
N
S
D
E
E
S
Y
A
--
T
V
-
Y
-
I
K---
D
P
K
L
T
I
E
-----
N
G
K
R
I
I
T
-----
A
-
T
L
K
D
S
---------
D
FF-
D
Y
----
L
K
V
-
E
F
H
-
D
---
V
K
V
4
HHSearch
41.96
38%
-111
- C8 -
-
2C4B
1
RNBR_BACAM
B:
[121-141]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
C
R
R
D
-----
S
-
D
C
L
A
G
---------
C
---
V
C
----
G
P
N
-
G
F
C
--------
46
Fugue
41.43
22%
-101
* C7 *
-
3CS5
-
NBLA_SYNE7
A:
[12-59]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
Q
Q
F
D
------
L
Q
K
Y
R
Q
Q
V
--
R
D
-
I
-
S
----
R
E
D
L
E
--------
D
L
F
I
E
V
-----
V
-
R
Q
K
M
A
---------
H
---
E
N
----
I
F
K
-
G
M
I
-
R
---
Q
G
S
45
Fugue
41.12
28%
-
- C5 -
-
4ZHJ
-
?
A:
[0-1330]
HMFTNVKSTIRRVDPEALNGRQLLKVVYVVLESQYQSALSAAVRNINRTNSSLAIQLTGYLIEELPENYANFKHDVSEANLFIASLIFIEDLADKVVEAVTPYRDNLDAAIVFPSMPQVMRLNKMGSFSMAQLGFQDAMLKLLRTLPTVLKYLPVEKAQDARNFMLSFQYWLGGSQENLENFLLMLTDKYVYPDLGLDVYPDMGIWHPLSMQMFENVKDYLEWYNQRPDISEDLKDPLAPCIGLIMQRTHLVTGDDAHYVGMVQELEAMGARVICVFSGGLDFSKPVNEYFWDKSEPLPIVDAVVSLTGFALVGQDHPRAIESLKKLNRPYMCALPLVFQHPIQVALQIAIPELDGAIEPIILIALQDRLEAIAQRAMKWANLRKKPKLDKKVAITVFSFPPDKGNVGTAAYLDVFGSIYEVMKGLQGNGYDVQDLPGSAKELMEAVIHDAQAQYNSPELNIAH
R
M
-
S
V
E
Q
Y
E
R
------
L
T
P
Y
S
V
R
L
--
E
E
-
N
-
W
----
G
K
-------------------------------------------------
P
P
-
G
H
L
N
S
---
D
G
Q