@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : DCTP1_HUMAN: (2020-01-31 )
MSVAGGEIRGDTGGEDTAAPGRFSFSPEPTLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHLARSSSRKYTELPHGAISEDQAVGPADIPCDSTGQTST
Atome Classification :
(20 SA)
.........10........20........30........40----.........50-------...------......60........70........80........90........100.........110.......120........130.......140.--......150.......160.......170
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
MSVAGGEIRGDTGGEDTAAPGRFSFSPEP
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
ER
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
WKTDGEPGPQGW
S
P
R
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
RCRVD
L
P
L
A
V
L
S
K-MDINRRR
Y
P
A
H
L
ARSSSRKYTE--LPHGAISEDQAVGPADIPCDSTGQTST
1
PsiBlast_PDB
88.09
75%
-95
- C2 -
-
2A3Q
-
DCTP1_MOUSE
A:
[22-134]
---------------------
P
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
-
M
D
T
N
R
Q
R
Y
P
V
H
L
S
--------------------------------------
42
Fugue
87.34
84%
-96
- C2 -
-
2A3Q
-
DCTP1_MOUSE
A:
[22-134]
---------------------
P
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
M
D
T
N
R
Q
R
-
Y
P
V
H
L
S
--------------------------------------
2
PsiBlast_PDB
85.67
75%
-87
- C2 -
-
2Q4P
-
DCTP1_MOUSE
A:
[22-134]
---------------------
P
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
-
M
D
T
N
R
Q
R
Y
P
V
H
L
S
--------------------------------------
3
PsiBlast_PDB
83.66
90%
-84
- C2 -
-
2OIE
-
DCTP1_MOUSE
A:
[8-107]
----------------------
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
-
M
--------------------------------------------------
24
HHSearch
83.49
87%
-64
- C2 -
-
2OIE
-
DCTP1_MOUSE
B:
[4-109]
------------------
G
S
R
P
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
-
M
D
T
------------------------------------------------
4
PsiBlast_PDB
81.57
90%
-75
- C2 -
-
2OIG
1
DCTP1_MOUSE
A:
[8-110]
----------------------
F
R
F
S
P
E
P
T
L
E
D
I
R
R
L
H
A
E
-----
F
A
A
E
R
D
W
E
Q
F
--------
H
Q
P
------
R
N
L
L
L
A
L
V
G
E
V
G
E
L
A
E
L
F
Q
W
K
S
D
T
E
P
G
P
Q
A
W
P
P
K
E
R
A
A
L
Q
E
E
L
S
D
V
L
--
I
Y
L
V
A
L
A
A
R
C
H
V
D
L
P
Q
A
V
I
S
K
-
M
D
T
N
-----------------------------------------------
22
HHSearch
60.25
33%
-121
- C2 -
-
4QGP
1
?
A:
[12-112]
-----------------------------
H
M
E
E
L
L
D
I
L
R
E
-----
F
R
D
S
R
G
W
L
K
Y
--------
H
T
P
------
K
N
L
A
V
S
I
S
I
E
V
A
E
L
L
E
I
F
Q
W
T
R
S
S
D
E
E
F
-
E
V
L
E
R
R
K
G
E
V
E
E
E
I
A
D
V
L
--
I
Y
L
L
F
L
C
D
V
A
E
I
N
P
I
E
A
V
K
R
K
-
M
E
K
N
E
R
K
Y
P
K
-----------------------------------------
25
HHSearch
59.42
23%
-87
- C2 -
-
2GTA
-
YPJD_BACSU
A:
[2-98]
--------------------------
S
D
K
T
M
K
D
I
Q
A
E
V
D
R
-----
Y
I
G
Q
F
K
E
G
-
Y
--------
F
S
P
------
L
A
M
M
A
R
L
T
E
E
L
G
E
L
A
R
E
V
N
H
R
Y
G
E
K
P
K
---
K
A
T
E
D
D
K
S
M
E
E
E
I
G
D
V
L
--
F
V
L
V
C
L
A
N
S
L
D
I
S
L
E
E
A
H
D
R
V
-
M
H
K
F
N
T
---------------------------------------------
5
PsiBlast_PDB
55.14
35%
-100
- C2 -
-
4QGP
1
?
A:
[22-112]
---------------------------------------
E
-----
F
R
D
S
R
G
W
L
K
Y
--------
H
T
P
------
K
N
L
A
V
S
I
S
I
E
V
A
E
L
L
E
I
F
Q
W
T
R
S
S
D
E
E
F
E
V
L
E
-
R
R
K
G
E
V
E
E
E
I
A
D
V
L
--
I
Y
L
L
F
L
C
D
V
A
E
I
N
P
I
E
A
V
K
R
K
-
M
E
K
N
E
R
K
Y
P
K
-----------------------------------------
44
Fugue
54.56
23%
-103
- C2 -
-
5IE9
-
?
A:
[1-103]
-------------------------
M
E
A
K
T
M
K
D
M
Q
K
E
V
D
A
-----
Y
I
G
Q
F
K
-
E
G
Y
--------
F
S
P
------
L
A
M
M
A
R
L
T
E
E
M
G
E
L
A
R
E
V
N
H
Y
Y
G
------------
E
R
S
I
E
E
E
L
G
D
V
L
--
F
V
M
I
C
M
A
N
S
L
N
I
D
L
E
T
A
H
N
I
V
-
M
N
K
F
N
T
R
D
K
D
R
----------------------------------------
49
Fugue
53.84
22%
-57
- C2 -
-
1QGT
-
?
A:
[1-142]
M
D
I
-------
D
P
Y
K
E
F
G
A
T
V
E
L
L
S
F
L
P
S
D
F
F
P
S
V
R
D
L
L
D
T
------
A
S
A
L
Y
R
E
A
L
--------
E
S
P
EHCSPH
H
T
A
L
R
Q
A
I
L
C
W
G
E
L
M
T
L
A
T
W
V
G
N
N
---------
L
E
D
P
A
S
R
D
L
V
V
N
Y
V
--
N
T
N
M
G
L
K
I
R
Q
L
L
W
F
H
I
S
C
L
T
F
----
G
R
E
T
V
L
E
Y
L
V
S
F
G
V
W
I
R
T
P
-----------
P
A
Y
R
P
P
N
A
P
I
L
S
T
-----
56
Fugue
53.47
17%
29
- C2 -
-
3HHC
-
IFNL3_HUMAN
A:
[34-196]
---
A
R
G
C
H
I
A
Q
F
K
S
L
S
P
Q
E
L
Q
A
F
K
R
A
K
D
A
L
E
E
S
L
L
L
K
D
C
K
CRSRL
F
P
R
T
W
D
L
R
Q
L
---------
Q
V
------
R
E
R
P
V
A
L
E
A
E
L
A
L
T
L
K
V
L
E
A
T
A
D
T
D
-----------
P
A
L
G
D
V
L
D
Q
P
L
--
H
T
L
H
H
I
L
S
Q
L
R
A
C
I
Q
----------
G
R
L
H
H
W
L
H
R
L
Q
E
A
P
K
K
E
S
P
GC
L
E
A
S
V
T
F
N
L
F
R
L
L
T
R
D
L
N
C
V
A
S
G
D
L
C
V
29
HHSearch
52.49
22%
-105
- C2 -
-
5IE9
-
?
A:
[2-102]
--------------------------
E
A
K
T
M
K
D
M
Q
K
E
V
D
A
-----
Y
I
G
Q
F
K
E
G
-
Y
--------
F
S
P
------
L
A
M
M
A
R
L
T
E
E
M
G
E
L
A
R
E
V
N
H
Y
Y
G
------------
E
R
S
I
E
E
E
L
G
D
V
L
--
F
V
M
I
C
M
A
N
S
L
N
I
D
L
E
T
A
H
N
I
V
-
M
N
K
F
N
T
R
D
K
D
-----------------------------------------
23
HHSearch
51.57
23%
-133
- C2 -
-
2GTA
-
YPJD_BACSU
C:
[2-99]
--------------------------
S
D
K
T
M
K
D
I
Q
A
E
V
D
R
-----
Y
I
G
Q
F
K
E
G
-
Y
--------
F
S
P
------
L
A
M
M
A
R
L
T
E
E
L
G
E
L
A
R
E
V
N
H
R
Y
---------------
S
M
E
E
E
I
G
D
V
L
--
F
V
L
V
C
L
A
N
S
L
D
I
S
L
E
E
A
H
D
R
V
-
M
H
K
F
N
T
R
--------------------------------------------
28
HHSearch
51.08
22%
-101
- C2 -
-
5IE9
-
?
C:
[2-102]
--------------------------
E
A
K
T
M
K
D
M
Q
K
E
V
D
A
-----
Y
I
G
Q
F
K
E
G
-
Y
--------
F
S
P
------
L
A
M
M
A
R
L
T
E
E
M
G
E
L
A
R
E
V
N
H
Y
Y
G
E
-----------
E
R
S
I
E
E
E
L
G
D
V
L
--
F
V
M
I
C
M
A
N
S
L
N
I
D
L
E
T
A
H
N
I
V
-
M
N
K
F
N
T
R
D
K
D
-----------------------------------------
34
HHSearch
46.77
28%
-78
- C2 -
-
1VMG
1
?
A:
[15-94]
----------------------------
L
E
L
K
E
L
Q
S
K
M
K
E
-----
M
Y
F
--
E
K
D
S
Q
--------
R
G
I
------
Y
A
T
F
T
W
L
V
E
E
V
G
E
L
A
E
A
L
L
S
N
-------------
N
L
D
S
I
Q
E
E
L
A
D
V
I
--
A
W
T
V
S
I
A
N
L
E
G
I
D
I
E
E
A
L
K
K
K
-
Y
K
-------------------------------------------------
26
HHSearch
45.86
27%
-41
- C2 -
-
2Q5Z
1
?
B:
[21-114]
----------------------------
M
K
L
S
E
L
Q
S
H
I
K
E
-----
F
D
Y
A
P
E
Q
-------------
S
------
E
H
Y
F
F
K
L
I
E
E
V
G
E
L
S
E
S
I
R
K
G
K
S
G
Q
P
T
----
L
D
E
L
K
G
S
V
A
E
E
L
Y
D
V
L
--
Y
Y
V
C
A
L
A
N
I
H
G
V
N
L
E
K
T
R
E
L
K
-
E
V
L
N
K
V
K
Y
N
R
-----------------------------------------
27
HHSearch
45.38
29%
-44
- C2 -
-
2Q73
-
?
C:
[1-91]
----------------------------
M
K
L
S
E
L
Q
S
H
I
K
E
-----
F
D
Y
A
P
E
Q
-------------
S
------
E
H
Y
F
F
K
L
I
E
E
V
G
E
L
S
E
S
I
R
K
G
K
S
G
Q
P
T
----
L
D
E
L
K
G
S
V
A
E
E
L
Y
D
V
L
--
Y
Y
V
C
A
L
A
N
I
H
G
V
N
L
E
K
T
H
E
L
K
-
E
V
L
N
K
V
K
--------------------------------------------
46
Fugue
44.76
19%
-46
- C2 -
-
2YXH
-
?
A:
[2-114]
------------------------------
V
E
R
L
L
E
I
I
E
R
-----
S
L
R
K
C
P
W
L
E
K
--------
Q
S
I
------
E
T
L
L
E
A
L
A
S
E
I
E
E
V
A
E
A
V
K
-------------
K
N
D
L
A
N
L
E
E
E
I
G
D
I
Y
DA
L
L
V
A
A
V
A
Q
R
D
Y
G
I
D
L
E
S
A
I
Q
K
-
V
V
E
K
I
S
H
R
K
P
W
L
F
W
E
E
K
I
S
L
E
E
--
A
E
K
I
W
K
E
R
K
K
-----------------
33
HHSearch
42.83
16%
-25
- C2 -
-
2YF4
2
?
D:
[3-121]
--------------------
D
P
F
T
M
S
D
L
P
C
P
P
T
N
A
E
R
L
H
E
-----
F
H
R
A
I
G
A
A
T
P
ERPTPPPP
E
L
L
------
R
L
R
Q
T
L
L
D
E
E
S
A
E
V
R
A
E
I
D
H
L
L
A
R
Q
A
A
G
E
A
L
S
A
G
D
L
A
P
L
A
H
E
L
A
D
L
L
--
Y
V
T
Y
G
A
L
D
Q
L
G
I
D
A
D
A
V
F
A
E
V
-
H
R
A
N
L
S
K
A
S
G
-----------------------------------------