@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ADT2_HUMAN: (2020-01-31 )
MTDAAVSFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWLYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTVTAVAGLTSYPFDTVRRRMMMQSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFVLVLYDEIKKYT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CDL_A_4(2C3E)
ADT1_BOVIN
[Raw transfer]



CDL_A_4(2C3E)
ADT1_BOVIN
[Raw transfer]



CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]



CDL_A_4(1OKC)
ADT1_BOVIN
[Raw transfer]



CDL_A_5(4C9G)
ADT2_YEAST
[Raw transfer]



CDL_A_5(4C9Q)
ADT3_YEAST
[Raw transfer]



CDL_A_4(4C9G)
ADT2_YEAST
[Raw transfer]



CDL_A_5(4C9J)
ADT3_YEAST
[Raw transfer]



CDL_A_6(6GCI)
?
[Raw transfer]



CDL_A_6(6GCI)
?
[Raw transfer]



CDL_A_5(4C9H)
ADT2_YEAST
[Raw transfer]



CDL_A_5(1OKC)
ADT1_BOVIN
[Raw transfer]
22 Fugue 85.2790% -67 * C8 *1OKC 5.4 ADT1_BOVIN
12 HHSearch 85.2790% -67 - C8 -1OKC 6.5 ADT1_BOVIN
1 PsiBlast_PDB 85.0589% -67 - C8 -1OKC 6.5 ADT1_BOVIN
2 PsiBlast_PDB 84.3389% -68 - C8 -2C3E 6.4 ADT1_BOVIN
11 HHSearch 84.2890% -68 - C8 -2C3E 6.4 ADT1_BOVIN
7 PsiBlast_PDB 71.2953% -49 - C8 -6GCI 3.4 ?
14 HHSearch 67.4953% -48 - C8 -6GCI 3.4 ?
5 PsiBlast_PDB 67.2154% -16 - C8 -4C9G 2.0 ADT2_YEAST
13 HHSearch 66.8453% -41 - C8 -4C9G 4.7 ADT2_YEAST
4 PsiBlast_PDB 64.4954% -16 - C8 -4C9Q 5.2 ADT3_YEAST
3 PsiBlast_PDB 63.9254% -10 - C8 -4C9J 5.8 ADT3_YEAST
6 PsiBlast_PDB 63.2254% -22 - C8 -4C9H 3.2 ADT2_YEAST
23 Fugue 48.9522% -8 - C5 -4J1Q - -
24 Fugue 48.0215% -13 * C4 *1WKV - CYSO_AERPE -
16 HHSearch 44.1125% -80 - C8 -4C9G - ADT2_YEAST -
17 HHSearch 37.5223% -79 - C8 -6GCI - ? -
36 Fugue 36.9912% -26 * C5 *1GHS - E13B_HORVU -
26 Fugue 36.4821% -6 - C1 -1CJD - CAPSD_BPPRD -
18 HHSearch 35.7223% -13 - C8 -2C3E - ADT1_BOVIN -
28 Fugue 35.7011% 8 * C7 *5JK0 - XERH_HELPY -