@TOME V3
(Feb 2022)

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Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NUDT4_HUMAN: (2020-02-02 )
MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IHP_A_17(2Q9P)
NUDT3_HUMAN
[Raw transfer]



IHP_A_4(2FVV)
NUDT3_HUMAN
[Raw transfer]



IHP_A_4(2FVV)
NUDT3_HUMAN
[Raw transfer]



EDO_A_3(5LTU)
NUDT4_HUMAN
[Raw transfer]



EDO_B_8(5LTU)
NUDT4_HUMAN
[Raw transfer]
1 PsiBlast_PDB 95.58100%-102 - C1 -5LTU 3.3 NUDT4_HUMAN
21 HHSearch 95.01100%-105 - C1 -5LTU 3.1 NUDT4_HUMAN
2 PsiBlast_PDB 93.94100% -80 - C1 -2DUK - NUDT4_MOUSE -
22 HHSearch 92.35100% -86 - C1 -2DUK - NUDT4_MOUSE -
5 PsiBlast_PDB 90.6593%-110 - C1 -3MCF - NUD10_HUMAN -
24 HHSearch 86.3082% -78 - C1 -2FVV 3.9 NUDT3_HUMAN
3 PsiBlast_PDB 83.8073% -71 - C1 -2FVV 3.9 NUDT3_HUMAN
4 PsiBlast_PDB 82.8873% -80 - C1 -2Q9P 4.9 NUDT3_HUMAN
30 HHSearch 79.6992% -95 - C1 -3MCF - NUD10_HUMAN -
49 Fugue 55.8818% 1 - C1 -1MQE - ? -
25 HHSearch 53.2421% -26 * C1 *5DEQ - ? -
36 HHSearch 51.4120% -70 - C1 -3ID9 - ? -
26 HHSearch 50.4118% -21 - C1 -3GZ5 - ? -
48 Fugue 46.2523% 3 - C1 -2B0V - ? -
56 Fugue 43.4719% -6 - C1 -1F3Y - ? -
28 HHSearch 42.4217% -73 - C1 -4ZBP - NUDT7_ARATH -
54 Fugue 41.3214% 36 - C1 -1VHZ - NUDE_ECOLI -
57 Fugue 39.9118% 23 - C1 -3Q93 - 8ODP_HUMAN -
40 HHSearch 39.2316% -23 - C1 -3E57 - ? -
41 HHSearch 38.7719% -16 - C1 -4S2X - RPPH_ECOLI -