@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PI42A_HUMAN: (2020-02-02 )
MATPGNLGSSVLASKTKTKKKHFVAQKVKLFRASDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAGAEISTVNPEQYSKRFLDFIGHILT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_3(3X01)
PI42B_HUMAN
[Raw transfer]



ANP_A_2(5E3T)
?
[Raw transfer]



AMP_A_3(3X05)
PI42B_HUMAN
[Raw transfer]



GNP_A_3(3X04)
PI42B_HUMAN
[Raw transfer]



ATP_A_2(6CMW)
?
[Raw transfer]



AMP_B_6(3X01)
PI42B_HUMAN
[Raw transfer]



5GP_A_3(3X0A)
PI42B_HUMAN
[Raw transfer]



5GP_A_3(3X0C)
PI42B_HUMAN
[Raw transfer]



5GP_A_3(3X02)
PI42B_HUMAN
[Raw transfer]



AMP_A_3(3X09)
PI42B_HUMAN
[Raw transfer]



5GP_A_3(3X06)
PI42B_HUMAN
[Raw transfer]



AMP_A_3(3X07)
PI42B_HUMAN
[Raw transfer]



ANP_A_3(3X03)
PI42B_HUMAN
[Raw transfer]



AMP_A_3(3X0B)
PI42B_HUMAN
[Raw transfer]
1 PsiBlast_PDB 97.0698%-111 - C5 -2YBX - PI42A_HUMAN -
14 PsiBlast_PDB 91.9277%-113 - C5 -3X05 6.0 PI42B_HUMAN
6 PsiBlast_PDB 90.6778%-105 - C5 -3X03 4.2 PI42B_HUMAN
5 PsiBlast_PDB 90.6378%-110 - C5 -3X02 4.8 PI42B_HUMAN
7 PsiBlast_PDB 90.3678%-115 - C5 -3X04 4.9 PI42B_HUMAN
13 PsiBlast_PDB 90.3177%-111 - C5 -3X0A 4.3 PI42B_HUMAN
8 PsiBlast_PDB 90.1977%-117 - C5 -3X07 4.6 PI42B_HUMAN
10 PsiBlast_PDB 90.1777%-118 - C5 -3X0B 5.2 PI42B_HUMAN
11 PsiBlast_PDB 90.1577%-110 - C5 -3X0C 5.0 PI42B_HUMAN
4 PsiBlast_PDB 89.7878%-111 - C5 -3X01 5.4 PI42B_HUMAN
9 PsiBlast_PDB 89.6277%-118 - C5 -3X08 - PI42B_HUMAN -
12 PsiBlast_PDB 89.5277%-110 - C5 -3X09 4.1 PI42B_HUMAN
15 PsiBlast_PDB 89.2077%-117 - C5 -3X06 4.7 PI42B_HUMAN
37 Fugue 87.9280% -91 - C5 -1BO1 - PI42B_HUMAN -
2 PsiBlast_PDB 86.9778% -90 - C5 -1BO1 - PI42B_HUMAN -
22 HHSearch 83.0477% -52 - C5 -3X01 4.5 PI42B_HUMAN
16 PsiBlast_PDB 71.5364%-145 - C5 -2GK9 - PI42C_HUMAN -
23 HHSearch 68.4165% -81 - C5 -2GK9 - PI42C_HUMAN -
20 PsiBlast_PDB 66.5731% -14 - C5 -5E3T 3.9 ?
18 PsiBlast_PDB 65.7931% -5 - C5 -6CMW 5.2 ?