@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PSA_HUMAN: (2020-02-02 )
MWLAAAAPSLARRLLFLGPPPPPLLLLVFSRSSRRRLHSLGLAAMPEKRPFERLPADVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYRSKYTTPSGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDRKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSSSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVSADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGMNMYLTKFQQKNAATEDLWESLENASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRLLRLSQKKFCAGGSYVGEDCPQWMVPITISTSEDPNQAKLKILMDKPEMNVVLKNVKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIISTVEVLKVMEAFVNEPNYTVWSDLSCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERLGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKDHVEGKQILSADLRSPVYLTVLKHGDGTTLDIMLKLHKQADMQEEKNRIERVLGATLLPDLIQKVLTFALSEEVRPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELYNRYQGGFLISRLIKLSVEGFAVDKMAGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDAESIHQYLLQRKASPPTV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BES_A_10(4KXB)
AMPE_HUMAN
[Raw transfer]



ASP_A_12(4KXA)
AMPE_HUMAN
[Raw transfer]



GLU_A_12(4KXD)
AMPE_HUMAN
[Raw transfer]



GLU_A_12(4KXD)
AMPE_HUMAN
[Raw transfer]



ARG_A_11(4KX9)
AMPE_HUMAN
[Raw transfer]



GLU_A_11(4KXC)
AMPE_HUMAN
[Raw transfer]



BES_A_12(4FYR)
AMPN_HUMAN
[Raw transfer]



ILE_A_25(6BV2)
AMPN_PIG
[Raw transfer]



ACY_A_22(4FYQ)
AMPN_HUMAN
[Raw transfer]
37 HHSearch 83.9233% 2 - C4 -5AB0 - ERAP2_HUMAN -
4 PsiBlast_PDB 81.9434% 13 - C4 -4KXA 3.7 AMPE_HUMAN
22 Fugue 81.8929% -84 - C4 -1Z1W - TRF3_THEAC -
3 PsiBlast_PDB 81.6334% 12 - C4 -4KX9 3.1 AMPE_HUMAN
7 PsiBlast_PDB 81.5834% 14 - C4 -4KXD 3.8 AMPE_HUMAN
5 PsiBlast_PDB 81.2834% 13 - C4 -4KXB 5.3 AMPE_HUMAN
38 HHSearch 81.2133% 9 - C4 -5AB0 - ERAP2_HUMAN -
6 PsiBlast_PDB 81.1734% 14 - C4 -4KXC 3.9 AMPE_HUMAN
40 HHSearch 80.9932% 14 - C4 -4FKE - AMPN_PIG -
2 PsiBlast_PDB 80.9934% 15 - C4 -4KX8 - AMPE_HUMAN -
1 PsiBlast_PDB 80.9534% 14 - C4 -4KX7 - AMPE_HUMAN -
41 HHSearch 80.3832% 13 - C4 -6BV2 4.0 AMPN_PIG
43 HHSearch 80.2131% -8 - C4 -5MJ6 - LCAP_HUMAN -
18 PsiBlast_PDB 80.1832% 12 - C4 -4FYR 3.7 AMPN_HUMAN
14 PsiBlast_PDB 80.1132% 11 - C4 -5LHD - AMPN_HUMAN -
20 PsiBlast_PDB 79.7832% 14 - C4 -4FYT - AMPN_HUMAN -
19 PsiBlast_PDB 79.7132% 12 - C4 -4FYS - AMPN_HUMAN -
42 HHSearch 79.6633% 15 - C4 -4KXD 3.8 AMPE_HUMAN
16 PsiBlast_PDB 79.0532% 15 - C4 -5K1V - ERAP2_HUMAN -
9 PsiBlast_PDB 79.0432% 20 - C4 -5AB0 - ERAP2_HUMAN -
17 PsiBlast_PDB 78.5732% 13 - C4 -4FYQ 3.8 AMPN_HUMAN