@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : D2PKQ6_KRIFD: (2019-01-27 )
MGNVPEAPLADPWLAYFAERGHRDVRRVGAGVEGVVYRLGEGRVAKVWSGRPPAEFELTREVYADLARHPLPFAVPEIFDVEHHEGVLVTYERELPGVSMRADSAQANYERKLPTRDSDALLAVLRGLASVPGTDAMRRLTVQGDDRPLWRDHDDFRDALAALVARAVTRHGAALARCVPDFAAGVERTQKALRSLPDAPVAAIHGDLVPPNIHIDAAGRPVAVLDFGFHTTAGDPAFEAAVTAAIWDMYGPHAAEHTEELTRLCAHELGYAPATLTTYQAAYALTTYDLFGLGDDDGHFRWCAEQLRRNAVFTA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




ADP_A_7(1J7L)
KKA3_ENTFL
[Raw transfer]




53 HHSearch 68.5718% -14 - C3 -5IGH - ? -
25 Fugue 67.3118% 9 - C3 -1J7L 6.2 KKA3_ENTFL
63 HHSearch 67.2317% -13 - C3 -6EF6 - ? -
54 HHSearch 65.6813% -14 - C3 -5IQI - AACA_STAAU -
52 HHSearch 65.6618% -6 - C3 -5IGI - ? -
51 HHSearch 65.2914% -8 - C3 -3TDW - ? -
26 Fugue 65.1514% -22 - C3 -2OLC - MTNK_BACSU -
56 HHSearch 65.0212% -15 - C3 -5IQC - AACA_STAAU -
32 Fugue 62.6115% -8 - C3 -1ZYL - SRKA_ECOLI -
61 HHSearch 62.4114% -35 - C3 -2PPQ - KHSE_AGRFC -
55 HHSearch 61.8619% -10 - C3 -5UXD - ? -
30 Fugue 61.5312% 8 - C3 -2QG7 - ? -
39 SP3 61.3015% 10 - C3 -1J7L 5.0 KKA3_ENTFL
69 HHSearch 60.6011% -8 - C3 -3JR1 - ? -
29 Fugue 59.2511% 17 - C3 -3JR1 - ? -
23 Fugue 58.7612% -5 - C3 -3HAM - ? -
44 SP3 58.0217% 0 - C- -1F3M - ? -
59 HHSearch 57.5713% -7 - C3 -4DCA - ? -
58 HHSearch 57.4012% 13 - C3 -5IWU - ? -
48 SP3 56.9818% 0 - C- -1DK5 - ? -