@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : A0A125YPH4_TOXGM_: (2019-02-27 )
MALSALRKRVAYFYDPDIGSYYYGPGHPMKPQRIRMAHALVLSYDLYKHMEVYRPHKSIEPELCLFHSSDYISFLSSVSPENYKEFSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLNHHQADICVNWSGGLHHAKRSEASGFCYINDIVLGILELLKYHARVMYIDIDIHHGDGVEEAFYVSHRVMTVSFHKFGDFFPGTGDVTDVGASQGKYYAVNVPLNDGMDDDSFVALFKPVITKCVDVYRPGAIVLQCGADSLTGDRLGKFNLTIKGHAACVAFVKSLDIPLLVLGGGGYTIRNVARCWAYETGVVLDRHREMSPHVPLNDYYDYYAPDFQLHLTPSSIPNSNSPEHLEKIKTRVLSNLSYLEHAPGVQFAYVPPDFFGEDNDDEDEFMQNQVDNEGGGRAAGATAHTAANAPYRIRRKDYANDFEDMADRDQKVPI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TSN_A_5(1C3R)
?
[Raw transfer]



NHB_A_6(1W22)
HDAC8_HUMAN
[Raw transfer]



TSN_A_13(1T64)
HDAC8_HUMAN
[Raw transfer]



B3N_A_5(1T67)
HDAC8_HUMAN
[Raw transfer]



SHH_A_3(1T69)
HDAC8_HUMAN
[Raw transfer]



HA3_A_4(2VQM)

[Raw transfer]



CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]
-
6EZ_A_7(5IX0)
HDAC2_HUMAN
[Raw transfer]



20Y_C_24(4LY1)
HDAC2_HUMAN
[Raw transfer]



TSN_A_14(1T64)
HDAC8_HUMAN
[Raw transfer]



TSN_A_14(1T64)
HDAC8_HUMAN
[Raw transfer]



EDO_A_11(5VI6)
HDAC8_HUMAN
[Raw transfer]



EDO_A_13(5VI6)
HDAC8_HUMAN
[Raw transfer]



EDO_A_9(5VI6)
HDAC8_HUMAN
[Raw transfer]
3 HHSearch 98.2264%-108 - C1 -5IX0 8.2 HDAC2_HUMAN
2 HHSearch 97.7264%-113 - C1 -4LY1 7.7 HDAC2_HUMAN
1 HHSearch 97.1464%-107 - C1 -4BKX 5.3 HDAC1_HUMAN
5 HHSearch 79.9141% -75 - C1 -1T64 5.2 HDAC8_HUMAN
24 Fugue 79.6640% -76 - C1 -4QA5 4.7 HDAC8_HUMAN
39 SP3 78.1833% -75 - C1 -1T64 5.2 HDAC8_HUMAN
4 HHSearch 78.0141% -76 - C1 -5VI6 4.6 HDAC8_HUMAN
41 SP3 77.5132% -79 - C1 -1T67 5.5 HDAC8_HUMAN
40 SP3 76.5732% -78 - C1 -1T69 4.9 HDAC8_HUMAN
42 SP3 76.1433% -80 * C1 *1W22 5.3 HDAC8_HUMAN
43 SP3 75.5332% -78 - C1 -1VKG - HDAC8_HUMAN -
23 Fugue 75.2133% -37 - C1 -4BZ7 - ? -
7 HHSearch 72.9034% -40 - C1 -6HSH - ? -
6 HHSearch 72.0834% -49 - C1 -4BZ5 - ? -
25 Fugue 71.8830% -44 - C1 -1C3P - ? -
8 HHSearch 68.8530% -54 - C1 -1C3P - ? -
9 HHSearch 68.5230% -55 - C1 -1C3R 5.9 ?
44 SP3 64.5023% -43 - C1 -1C3P - ? -
31 Fugue 63.6621% -38 - C1 -5IKK - CLR3_SCHPO -
13 HHSearch 61.7825% -37 - C1 -5G0Y - HDAH_PSEAE -