@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S8EP32_TOXGM_: (2019-02-27 )
MGRRKSVLYFYDENIGNFHYGPSHPMKPHRVRMTHDLIQAYDLLQSMDIVKPLKPAVEDLTRFHANDYVDFLRASAQSRLEASLSPRPFLFFSPSPAAARSASRPSPPPQAEGAAAVSAGASGVSVVQSGSGSRVRSTLHPLRSESRSVSPATSAFDSRVPPEAVGADALSSTDARGRTPPKSLGADLGPGGWSRAATQKPPFLQASSGDGAHGPLGLQCPSAAEETGTGGQAPAWAPPGVSPSLRRGEDANGLLSSAAFDEEVAAPPVPLSSSLADQMARFNVGEDCPVFDGLWEYCQTYSGGSIEGARRVVRGEYDWAINWAGGLHHGKKHEASGFCYINDCVLAALEFLRFKHRVLYVDVDIHHGDGVEEAFYTSPRVLCCSFHKYGDYFPGTGALDDVGIDEGLGYSVNVPLSEGVDDAMYTRLFRQVMDMIMESYRPEAVVLQCGADSLSGDRLGCFNLSIDGHSEAVRYFCSKDVPALFLGGGGYTLRNVPRCWATETGYVLGLSLNPNIPEESEYVGYYGPDSTLHVRTSNMENRNEDSYVQHVIERISQTLKDHVRPVGAQISANYFLDDSVMDKSDQIRALLADEEEEKAMDSSGDAEDADGAGRFEEISNRNRG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B3N_A_5(1T67)
HDAC8_HUMAN
[Raw transfer]



SHH_A_3(1T69)
HDAC8_HUMAN
[Raw transfer]



AH7_A_7(5WGM)
?
[Raw transfer]



TFG_A_8(2VQJ)

[Raw transfer]



TSN_A_13(1T64)
HDAC8_HUMAN
[Raw transfer]



TSN_A_5(1C3R)
?
[Raw transfer]



N4R_A_10(5G0J)
?
[Raw transfer]



CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]
-
HA3_A_4(2VQM)

[Raw transfer]



TSN_A_14(1T64)
HDAC8_HUMAN
[Raw transfer]



CHAIN_D_4(4QA5)
HDAC8_HUMAN
[Raw transfer]
-
TSN_B_6(1C3R)
?
[Raw transfer]



TSN_A_14(1T64)
HDAC8_HUMAN
[Raw transfer]



6EZ_A_7(5IX0)
HDAC2_HUMAN
[Raw transfer]



NHB_A_6(1W22)
HDAC8_HUMAN
[Raw transfer]



20Y_C_24(4LY1)
HDAC2_HUMAN
[Raw transfer]



MCM_C_13(4QA5)
HDAC8_HUMAN
[Raw transfer]



EDO_A_11(5VI6)
HDAC8_HUMAN
[Raw transfer]



EDO_A_13(5VI6)
HDAC8_HUMAN
[Raw transfer]



EDO_A_9(5VI6)
HDAC8_HUMAN
[Raw transfer]



NHB_B_10(1W22)
HDAC8_HUMAN
[Raw transfer]
2 HHSearch 98.4453%-115 - C3 -4LY1 7.8 HDAC2_HUMAN
3 HHSearch 97.6253%-114 - C3 -5IX0 7.6 HDAC2_HUMAN
1 HHSearch 95.3249%-113 - C3 -4BKX 5.2 HDAC1_HUMAN
5 HHSearch 83.8039% -69 - C3 -1T64 5.2 HDAC8_HUMAN
4 HHSearch 83.4939% -70 - C3 -5VI6 5.0 HDAC8_HUMAN
6 HHSearch 81.5335% -38 - C3 -4BZ5 4.6 ?
7 HHSearch 80.6935% -35 - C3 -6HSH 4.3 ?
39 SP3 77.1723% -70 - C3 -1T67 4.0 HDAC8_HUMAN
21 Fugue 74.8729% -25 - C3 -4BZ7 - ? -
28 Fugue 74.5626% 28 - C3 -5G0J - ? -
22 Fugue 74.3537% -20 - C3 -4QA5 4.0 HDAC8_HUMAN
9 HHSearch 68.6128% -36 - C3 -1C3R 5.9 ?
8 HHSearch 68.4027% -32 - C3 -1C3P 4.8 ?
42 SP3 66.5515% -45 - C3 -1C3P - ? -
37 SP3 66.1120% -13 - C3 -1T64 - HDAC8_HUMAN -
41 SP3 65.6220% -17 - C3 -1W22 4.7 HDAC8_HUMAN
10 HHSearch 65.0925% -14 - C3 -2VQM 4.3
11 HHSearch 64.8525% -2 - C3 -2VQJ 4.0
38 SP3 64.8420% -17 * C3 *1T69 2.9 HDAC8_HUMAN
16 HHSearch 63.8624% -13 - C3 -5WGM 5.5 ?