@TOME V3
(Feb 2022)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S8F6L4_TOXGM_: (2019-02-27 )
MARFCGSPPPCSPKERPDDRPSPSSPPSLSSSAPLSLRASVSPASPSSRLSFPPISDLSYYSSRSPPSSSAFSSSSCASVALLIDEEEMASPFSHAGPASHPESPSRISAILRTLVHHGWLSRKTGMGVQQSEDASEKPQTEETHPAVSSLSPPTSSACGETQAAHTDGREQRRSLLGPATKSNAVPGVSECPSLCLYESPSDGASVSLSPPGEDGAPPVSSRLPACSSSEGRRLRDFDASVPRESPPAFPFYSTHPSLLVLPCGRLATDEELCFCHTAGYVSRVESVFPSLGSSLPRKAAKAGAAKGRGVPGEKEKKALHASLPDRFKKGRRWSSHNVDTDSKSTSCHSPSAASSADSSLSAQSSASSPSSRASFPLPSSLSVVSVSETPPSPFSRLNAASADSSSNAFDCHLSTHPRSLDGTQPALFPGSCGGEGNSGHPVSRSEALCEAETVASSEVHATPLAEVTRAPGTGFGGAAAAREEEKSEKREAVFPCSSPVSLSVLSTAPSTVASLEESSDARTACDAYAASLEAEPCAVTDAKPSAALPPALAVSSSCESHLSSEVTEELGNNGPASPALPQFVNLFGGDTFICPRTPHTARLAAGAALELCDLIYGSPTVERHKETRRKRQGLRRKESKGERHAERHRERQQQGGRQERHLEGDEELKAREGETEARLASGVSDEGGRGACSGVCDGRDKQDSEREDDTPAATEEHGGEDRRDDTPAATEEHGGEDRRDGPNEQRQENKVKRGFAIIRPPGHHACSHEAAGFCIYNNVALAANYLLANHGLSRVAILDWDVHHGNGTQDLFYNSSSVLYLSVHRFEKAKPVSASHGEALHASPSPGAGAAGPSPESPRASDSPAASGAAFYPGTGSLTETGVSVGRGYTINVPLSRGYTDGDMFWVFCGVIAPALTAFRPQAILVSAGFDAAAGDPLGGCLLSPALFAWMTRQVCRLADIHCEGKALFFLEGGYQGDVLGACVEACVAALVNLSEENKPEERHRPKETADTAEDAGKGEEKPVKRRESPRGARDRGRDCVDQTVQLCQKERRSRDENEAACSRSLLSGRLGETLARLDSGILQGVEEGVELPSTEGPSACGSPPSISLPASLRVHANPPGWPPFRVLSPSSASFPSPASPLSSYALPRLLEEPVAAFCPKCRHRVRKRTSLSATSSAGEALSRGASRRASACNSDLSFFVEKRKEPKFVPEPFPPAERWVVIPPSAVDVAMRDAGDVARWAPTATAETPRRKKGRGDRKKKGEKGRSEARKSGSRNANCEERDSHEDVALRLQGIASEVETETGRATPVSVSESCLSPCSNVLLPAFPADSARFGSTLRNPCPTVRSPGALSQGHGLPAVCPQFGSRPSSPSTVLSLSPLCKVWASSPASRPTEVSSACGPLSDEVTSLCPGFRLDAIEEGSQEMTNSQLPQVLGALSASSLAATPGPQCPTSPALVCAACGVPLETAETAFPSSCPASPTLSFSSFSAAASPASFVARPRSGSVSDHVRVGKTQNDGGRQLQKSVVCRQATYDTLRLVRRVHAGSPFFLPPLPPLPKTVKTKSVEAAREQTDGDAETAEQVSLCLREGGDFRDQATDQQSLAHAQPPDSASDGTETRHSTHGVRGSRASAAPEPRPKTPDLSATPSIASPLASSCSALSSSGPPHTSTTPCGSTSSFSSSLSVSASLLPASRTLANVLPAGLLSHVRGRIVGGRARGAREESEAALQRNETIEQGQLVKLCNWGEAAFYTWVQMHSKKGEPEETDSGEDVTVTLQALETLFGRLQRPRKNSRENSGELQRKSKDENPTGSETLAVHTTRMPRQEAVPSAVLSFDPQQVLDLLRIQPDGVAISEPPSASSVASDALSPSSVSSDVATELAKFMPRCHRVFWTHAWALAEPPSTRKTNCEGGRKRCHGDEGMGEKEGESRLPRSPTEPRDASVADVDRRSRSALNSSQQSVPQGSSGEASRSSSSSASSSCRGSSGPESRGAPLAFPASSACGSRFACAVALADLAQFVRPCVMDIKMGIQMYDPSCTDAGKIQRMQEKARGRSVGSHGFFICGVSAGAVDSGTARVSEEISTEAGKSKVLESETTEDLCGGSEACDECNRGAAQDAGQVAPSSLRPFVLSSQEAYAVTQDEAFLRVFTNFFCVNNSTELAARLIRKCLGKLATLQRFFERQKQVSFYGSSLLFVFDADPAPDRLPVLRDSSDGPPALSVRRTQYAGTTQTQRPPVLQQNDRRGGGNAARRRDAHRAADVECAECGRKREAVYDAIVESFGVYMVDFAHVNFSRKQHDRGYLFGLANLQRLFARVLHSLGSSPSPAIAEAAVVSEEETRANSSESGEKKNEAEPKHDREGRP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

N4R_A_10(5G0J)
?
[Raw transfer]



TSN_A_13(1T64)
HDAC8_HUMAN
[Raw transfer]



TSN_A_3(5WGI)
?
[Raw transfer]



7H1_A_6(5G1A)
HDAH_ALCSD
[Raw transfer]



TFG_A_8(2VQJ)

[Raw transfer]



AH7_A_7(5WGM)
?
[Raw transfer]



HA3_A_4(2VQM)

[Raw transfer]



CHAIN_C_3(4QA5)
HDAC8_HUMAN
[Raw transfer]
-
PEG_A_22(5WGI)
?
[Raw transfer]



EDO_A_4(5JI5)
?
[Raw transfer]



EDO_A_12(5VI6)
HDAC8_HUMAN
[Raw transfer]
26 Fugue 83.8526% 23 - C1 -5G0J 6.5 ?
27 Fugue 82.3324% 25 - C1 -5IKK - CLR3_SCHPO -
29 Fugue 73.4325% -19 - C1 -4QA5 4.9 HDAC8_HUMAN
21 Fugue 69.9829% 4 - C1 -1ZZ1 3.9 HDAH_ALCSD
28 Fugue 69.9120% 7 - C1 -4BZ7 4.7 ?
1 HHSearch 63.1735% -37 - C1 -2VQM 3.1
2 HHSearch 61.9335% -36 - C1 -2VQJ 3.6
11 HHSearch 61.8939%-119 - C1 -5JI5 2.0 ?
24 Fugue 61.5320% 10 - C1 -1C3P 4.8 ?
5 HHSearch 60.7235%-126 - C1 -5G0X - HDAH_PSEAE -
4 HHSearch 60.6435%-123 - C1 -5G0Y - HDAH_PSEAE -
9 HHSearch 60.6340%-115 - C1 -5G1A 4.4 HDAH_ALCSD
8 HHSearch 60.3836% -41 - C1 -5WGI 4.7 ?
7 HHSearch 60.1536% -40 - C1 -5WGM 4.9 ?
10 HHSearch 59.8340%-113 - C1 -5G1B - HDAH_ALCSD -
3 HHSearch 58.8740% -48 - C1 -5IKK - CLR3_SCHPO -
25 Fugue 58.8025% 29 - C1 -3MEN Error APAHL_BURP1
14 HHSearch 58.3126%-122 * C1 *1T64 4.5 HDAC8_HUMAN
12 HHSearch 57.4126%-124 - C1 -5VI6 2.9 HDAC8_HUMAN
16 HHSearch 55.2732% -76 - C1 -4ZUR - APAH_MYCRA -