@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ARL2_HUMAN: (2020-01-31 )
MGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTAD

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_F_8(1MR3)
ARF2_YEAST
[Raw transfer]




GNP_A_7(3TJZ)
ARF1_YEAST
[Raw transfer]




GDP_D_4(1MOZ)
ARL1_YEAST
[Raw transfer]




GTP_C_9(2H57)
ARL6_HUMAN
[Raw transfer]




GTP_A_9(3VHX)
ARF6_MOUSE
[Raw transfer]




GTP_B_8(2H57)
ARL6_HUMAN
[Raw transfer]




GNP_B_7(4M9Q)
ARL13_CHLRE
[Raw transfer]




GDP_A_5(1R8S)
ARF1_BOVIN
[Raw transfer]




GDP_A_2(2H17)
ARL5A_HUMAN
[Raw transfer]




GDP_D_4(1Z6Y)
ARL5A_HUMAN
[Raw transfer]




GDP_B_6(3N5C)
ARF6_HUMAN
[Raw transfer]




GDP_A_2(3LRP)
ARF1_PLAF7
[Raw transfer]




GDP_A_10(1F6B)
SAR1B_CRIGR
[Raw transfer]




GDP_A_3(2X77)
?
[Raw transfer]




GDP_B_7(2FA9)
SAR1B_CRIGR
[Raw transfer]




GDP_B_5(2X77)
?
[Raw transfer]




GOL_F_15(1MR3)
ARF2_YEAST
[Raw transfer]




AFB_A_9(1R8Q)
ARF1_BOVIN
[Raw transfer]




21 HHSearch 93.90100%-116 - C2 -3DOE - ARL2_HUMAN -
1 PsiBlast_PDB 93.90100%-116 - C2 -3DOE - ARL2_HUMAN -
2 PsiBlast_PDB 92.80100%-114 - C2 -3DOF - ARL2_HUMAN -
4 PsiBlast_PDB 91.0396%-128 - C2 -1KSG - ARL2_MOUSE -
22 HHSearch 89.1996%-132 - C2 -1KSH - ARL2_MOUSE -
3 PsiBlast_PDB 89.1996%-132 - C2 -1KSH - ARL2_MOUSE -
5 PsiBlast_PDB 87.0894%-129 - C2 -1KSJ - ARL2_MOUSE -
6 PsiBlast_PDB 84.7895%-140 - C2 -4GOK - ARL2_MOUSE -
7 PsiBlast_PDB 76.6656%-131 - C2 -5DI3 - ARL3_CHLRE -
28 HHSearch 75.6146%-143 - C2 -1MOZ 5.4 ARL1_YEAST
8 PsiBlast_PDB 75.3157%-125 - C2 -5DE3 - ARL3_CHLRE -
17 PsiBlast_PDB 74.7654%-135 - C2 -3BH6 - ARL3_MOUSE -
14 PsiBlast_PDB 74.6847%-150 - C2 -1MOZ - ARL1_YEAST -
26 HHSearch 74.1946%-128 - C2 -3LRP 7.1 ARF1_PLAF7
36 HHSearch 73.9548%-148 - C2 -1R8S 8.3 ARF1_BOVIN
20 PsiBlast_PDB 73.4346%-145 - C2 -1R8Q 6.3 ARF1_BOVIN
15 PsiBlast_PDB 73.3354%-132 - C2 -3BH7 - ARL3_MOUSE -
23 HHSearch 72.6641%-139 - C2 -1ZJ6 - ARL5A_HUMAN -
29 HHSearch 72.2343%-140 - C2 -2H17 7.9 ARL5A_HUMAN
30 HHSearch 71.9446%-115 - C2 -2X77 6.3 ?
24 HHSearch 71.0243%-124 - C2 -1MR3 2.9 ARF2_YEAST
27 HHSearch 70.8745%-140 - C2 -3VHX 9.5 ARF6_MOUSE
40 HHSearch 69.7646%-138 - C2 -3TJZ 6.3 ARF1_YEAST
25 HHSearch 69.2741%-139 - C2 -1Z6Y 7.2 ARL5A_HUMAN
35 HHSearch 67.8446%-143 - C2 -3N5C 7.8 ARF6_HUMAN
31 HHSearch 67.2146%-131 - C2 -2X77 6.8 ?
32 HHSearch 66.6131%-121 - C2 -2FA9 5.5 SAR1B_CRIGR
34 HHSearch 65.8331%-116 - C2 -1F6B 7.0 SAR1B_CRIGR
37 HHSearch 63.9333% -95 - C2 -4M9Q 8.8 ARL13_CHLRE
38 HHSearch 53.9436% 13 - C2 -2H57 9.6 ARL6_HUMAN
39 HHSearch 53.2836% 16 - C2 -2H57 9.6 ARL6_HUMAN