@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BDH2_HUMAN: (2020-01-31 )
MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_10(2AG5)
BDH2_HUMAN
[Raw transfer]




NAD_A_10(2AG5)
BDH2_HUMAN
[Raw transfer]




1 PsiBlast_PDB 98.19100%-121 - C4 -2AG5 12.0 BDH2_HUMAN
41 HHSearch 97.48100%-121 - C4 -2AG5 12.0 BDH2_HUMAN
2 PsiBlast_PDB 73.8243%-126 - C4 -4YQZ - ? -
5 PsiBlast_PDB 71.6033% -74 - C4 -4NBT - ? -
10 PsiBlast_PDB 67.8834% -44 - C4 -5ITW - BACC_BACSU -
9 PsiBlast_PDB 67.6434% -47 - C4 -5ITV - BACC_BACSU -
17 PsiBlast_PDB 65.9235% -20 - C4 -2CFC - HCDR_XANP2 -
4 PsiBlast_PDB 65.9034% -32 - C4 -4DQX - ? -
18 PsiBlast_PDB 65.1034% -35 - C4 -4NBU - ? -
42 HHSearch 63.8424% -20 - C4 -5VPS - ? -
15 PsiBlast_PDB 63.6933% -13 - C4 -3RRO - FABG_VIBCH -
39 HHSearch 62.8624% -23 - C4 -5IDY - ? -
11 PsiBlast_PDB 62.3833% -10 - C4 -3TZH - ? -
16 PsiBlast_PDB 62.0933% -14 - C4 -4I08 - FABG_VIBCH -
14 PsiBlast_PDB 61.5233% -11 - C4 -3RSH - FABG_VIBCH -
38 HHSearch 60.6328% -60 - C4 -4O6V - ? -
37 HHSearch 60.5828% -57 - C4 -4O6V - ? -
13 PsiBlast_PDB 60.5633% -11 - C4 -4WK6 - ? -
44 HHSearch 60.3927% -19 - C4 -3LF2 - ? -
54 HHSearch 60.3125% -13 * C4 *2Z1N - ? -