@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CATG_HUMAN: (2020-01-31 )
MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMRSFKLLDQMETPL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

OHH_G_7(1T32)
CATG_HUMAN
[Raw transfer]




OHH_A_12(1T31)
CMA1_HUMAN
[Raw transfer]




OHH_G_7(1T32)
CATG_HUMAN
[Raw transfer]




KTP_B_4(1KYN)
CATG_HUMAN
[Raw transfer]




DRX_A_2(2HVX)
CMA1_HUMAN
[Raw transfer]




8W3_A_5(5YJM)
CMA1_HUMAN
[Raw transfer]




8W6_A_5(5YJP)
CMA1_HUMAN
[Raw transfer]




PMS_B_2(1KLT)
CMA1_HUMAN
[Raw transfer]




4 PsiBlast_PDB 99.39100%-113 - C2 -1CGH - CATG_HUMAN -
2 PsiBlast_PDB 99.11100%-110 - C2 -1AU8 - CATG_HUMAN -
43 HHSearch 98.47100%-110 - C2 -1CGH - CATG_HUMAN -
1 PsiBlast_PDB 98.21100%-114 - C2 -1KYN 5.3 CATG_HUMAN
3 PsiBlast_PDB 98.03100%-106 - C2 -1T32 10.0 CATG_HUMAN
44 HHSearch 97.53100%-105 - C2 -1T32 10.0 CATG_HUMAN
10 PsiBlast_PDB 81.4856% -85 - C2 -3TJV - GRAH_HUMAN -
9 PsiBlast_PDB 80.9356% -81 - C2 -3TJU - GRAH_HUMAN -
11 PsiBlast_PDB 80.8356% -86 - C2 -3TK9 - GRAH_HUMAN -
5 PsiBlast_PDB 80.4257% -73 - C2 -1EUF - DDN1_BOVIN -
40 HHSearch 79.7956% -83 - C2 -3TK9 - GRAH_HUMAN -
41 HHSearch 78.8756% -80 - C2 -4GAW - GRAH_HUMAN -
47 HHSearch 78.1056% -52 - C2 -1FQ3 - GRAB_HUMAN -
49 HHSearch 77.8256% -53 - C2 -1IAU - GRAB_HUMAN -
8 PsiBlast_PDB 77.1356% -83 - C2 -4GAW - GRAH_HUMAN -
18 PsiBlast_PDB 71.6153% -8 - C2 -3FZZ - GRAC_MOUSE -
6 PsiBlast_PDB 71.2655% -57 - C2 -1IAU - GRAB_HUMAN -
7 PsiBlast_PDB 68.9755% -53 - C2 -1FQ3 - GRAB_HUMAN -
50 HHSearch 67.8238% -16 - C2 -4Q7X - PRS57_HUMAN -
51 HHSearch 67.4338% -22 - C2 -4Q7Z - PRS57_HUMAN -
17 PsiBlast_PDB 65.6952% -22 - C2 -1KLT 2.9 CMA1_HUMAN
20 PsiBlast_PDB 65.1051% -20 - C2 -1T31 8.4 CMA1_HUMAN
45 HHSearch 64.8150% -26 - C2 -2HVX 5.5 CMA1_HUMAN
15 PsiBlast_PDB 64.2152% -27 - C2 -5YJP 9.4 CMA1_HUMAN
14 PsiBlast_PDB 64.0352% -24 - C2 -5YJM 10.2 CMA1_HUMAN