@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CPSF5_HUMAN: (2020-01-31 )
MSVVPPNRSQTGWPRGVTQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B4P_A_2(3BHO)
CPSF5_HUMAN
[Raw transfer]




B4P_A_2(3BHO)
CPSF5_HUMAN
[Raw transfer]




GOL_A_4(3MDI)
CPSF5_HUMAN
[Raw transfer]




GOL_A_4(3MDG)
CPSF5_HUMAN
[Raw transfer]




GOL_A_5(3N9U)
CPSF5_HUMAN
[Raw transfer]




GOL_A_2(3BAP)
CPSF5_HUMAN
[Raw transfer]




38 HHSearch 98.48100%-117 - C- -3Q2S - CPSF5_HUMAN -
7 PsiBlast_PDB 98.48100%-117 - C- -3Q2S - CPSF5_HUMAN -
37 HHSearch 98.38100%-124 - C4 -3BHO 4.4 CPSF5_HUMAN
4 PsiBlast_PDB 98.27100%-124 - C4 -3BHO 4.4 CPSF5_HUMAN
6 PsiBlast_PDB 98.1899%-125 - C4 -3N9U 4.1 CPSF5_HUMAN
3 PsiBlast_PDB 97.5598%-129 - C4 -3BAP 3.4 CPSF5_HUMAN
1 PsiBlast_PDB 96.48100%-125 - C4 -3MDG 2.4 CPSF5_HUMAN
8 PsiBlast_PDB 96.10100%-119 - C4 -3Q2T - CPSF5_HUMAN -
21 Fugue 95.86100%-126 - C4 -2CL3 - CPSF5_HUMAN -
5 PsiBlast_PDB 95.8499%-126 - C4 -2CL3 - CPSF5_HUMAN -
9 PsiBlast_PDB 95.2298%-111 - C4 -2J8Q - CPSF5_HUMAN -
10 PsiBlast_PDB 95.15100%-121 - C4 -3P5T - CPSF5_HUMAN -
2 PsiBlast_PDB 95.00100%-116 - C4 -3MDI 3.9 CPSF5_HUMAN
11 PsiBlast_PDB 93.02100%-114 - C4 -3P6Y - CPSF5_HUMAN -
35 Fugue 48.7110% 9 - C4 -2A6T - DCP2_SCHPO -
24 Fugue 41.7110% -57 - C4 -1VHZ - NUDE_ECOLI -
32 Fugue 40.0920% -56 - C4 -5M1P - ? -
34 Fugue 37.8711% -5 - C3 -1QWT - IRF3_HUMAN -
22 Fugue 36.329% -61 - C4 -1G0S - ADPP_ECOLI -
29 Fugue 31.3614% -67 - C- -3F13 - ? -