@TOME V3
(Feb 2022)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DHB4_HUMAN: (2020-01-31 )
MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMTQTVMPEDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRQKNHPMTPEAVKANWKKICDFENASKPQSIQESTGSIIEVLSKIDSEGGVSANHTSRATSTATSGFAGAIGQKLPPFSYAYTELEAIMYALGVGASIKDPKDLKFIYEGSSDFSCLPTFGVIIGQKSMMGGGLAEIPGLSINFAKVLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYSEKELICHNQFSLFLVGSGGFGGKRTSDKVKVAVAIPNRPPDAVLTDTTSLNQAALYRLSGDWNPLHIDPNFASLAGFDKPILHGLCTFGFSARRVLQQFADNDVSRFKAIKARFAKPVYPGQTLQTEMWKEGNRIHFQTKVQETGDIVISNAYVDLAPTSGTSAKTPSEGGKLQSTFVFEEIGRRLKDIGPEVVKKVNAVFEWHITKGGNIGAKWTIDLKSGSGKVYQGPAKGAADTTIILSDEDFMEVVLGKLDPQKAFFSGRLKARGNIMLSQKLQMILKDYAKL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_11(4KZP)
?
[Raw transfer]
2 PsiBlast_PDB 86.75100% -98 - C1 -1ZBQ - DHB4_HUMAN -
56 HHSearch 86.27100% -98 - C1 -1ZBQ - DHB4_HUMAN -
4 PsiBlast_PDB 81.9988%-102 - C1 -1GZ6 - DHB4_RAT -
53 HHSearch 81.9792%-101 - C1 -1GZ6 - DHB4_RAT -
21 Fugue 71.0690% -58 - C1 -1GZ6 - DHB4_RAT -
37 HHSearch 70.19100% -97 - C1 -1S9C - DHB4_HUMAN -
3 PsiBlast_PDB 70.0299% -97 - C1 -1S9C - DHB4_HUMAN -
6 PsiBlast_PDB 66.8850% -95 - C1 -2ET6 - FOX2_CANTR -
36 HHSearch 64.9454% - * C1 *3OML - DHB4_DROME -
1 PsiBlast_PDB 63.4452% - - C1 -3OML - DHB4_DROME -
41 HHSearch 52.2237% -33 - C1 -3KHP - ? -
8 PsiBlast_PDB 51.3045% -31 - C1 -3QLJ - ? -
19 PsiBlast_PDB 50.6235% -52 - C1 -2PNF - FABG_AQUAE -
22 Fugue 50.3839% -24 - C1 -1PN2 - FOX2_CANTR -
20 PsiBlast_PDB 49.7835% -53 - C1 -2P68 - FABG_AQUAE -
16 PsiBlast_PDB 49.7739% -48 - C1 -4RZH - FABG_SYNY3 -
40 HHSearch 48.7438% -17 - C1 -1PN2 - FOX2_CANTR -
44 HHSearch 48.2938% -35 - C1 -3KHP - ? -
11 PsiBlast_PDB 48.2239% -12 - C1 -1PN4 - FOX2_CANTR -
39 HHSearch 47.9834% -1 - C1 -3KH8 - ? -
13 PsiBlast_PDB 47.3139% -27 - C1 -4KZP 3.2 ?