@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DHX9_HUMAN: (2020-02-01 )
MGDVKNFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYNYTGMGNSTNKKDAQSNAARDFVNYLVRINEIKSEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALKAENNSEVGASGYGVPGPTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIYIKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVVEAYSGLTKKKEGETVEPYKVNLSQDLEHQLQNIIQELNLEILPPPEDPSVPVALNIGKLAQFEPSQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDANCNLICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPVNERMLNMIRQISRPSAAGINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGSANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGYFGQGRGGGGY

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_D_4(5VHC)
DHX36_BOVIN
[Raw transfer]



ADP_A_11(6QIE)
?
[Raw transfer]



ADP_A_2(5LTJ)
?
[Raw transfer]



ADP_A_5(3LLM)
DHX9_HUMAN
[Raw transfer]



ADP_A_5(3LLM)
DHX9_HUMAN
[Raw transfer]



ADP_D_2(5VHD)
DHX36_BOVIN
[Raw transfer]



ADP_A_2(6FAC)
?
[Raw transfer]



ADP_A_2(6FAA)
?
[Raw transfer]
43 Fugue 86.2355% -8 - C2 -5AOR - MLE_DROME -
21 HHSearch 85.3353% -12 - C2 -5AOR - MLE_DROME -
1 PsiBlast_PDB 84.7850% -9 - C2 -5AOR - MLE_DROME -
22 HHSearch 64.9838% -26 - C2 -5VHE - DHX36_BOVIN -
25 HHSearch 63.4939% -27 - C2 -5VHA - DHX36_BOVIN -
24 HHSearch 62.7735% -15 - C2 -5N9D - ? -
23 HHSearch 61.9535% -14 - C2 -5N8R - ? -
4 PsiBlast_PDB 60.4338% -5 - C2 -5VHC 7.5 DHX36_BOVIN
5 PsiBlast_PDB 59.9738% -4 - C2 -5VHD 7.5 DHX36_BOVIN
3 PsiBlast_PDB 58.8938% 4 - C2 -5VHA - DHX36_BOVIN -
10 PsiBlast_PDB 57.1036% -15 - C2 -5N8Z - ? -
12 PsiBlast_PDB 56.8236% -13 - C2 -5N94 - ? -
7 PsiBlast_PDB 56.5736% -11 - C2 -5N8R - ? -
15 PsiBlast_PDB 56.5036% -10 - C2 -5N9A - ? -
11 PsiBlast_PDB 56.5036% -10 - C2 -5N90 - ? -
9 PsiBlast_PDB 56.5036% -10 - C2 -5N8U - ? -
17 PsiBlast_PDB 56.4636% -10 - C2 -5N9E - ? -
13 PsiBlast_PDB 56.3036% -11 - C2 -5N96 - ? -
18 PsiBlast_PDB 56.2836% -10 - C2 -5N9F - ? -
16 PsiBlast_PDB 56.2036% -8 - C2 -5N9D - ? -
41 HHSearch 50.6531% -33 - C2 -6FAA 7.2 ?
40 HHSearch 50.3431% -32 - C2 -6FAC 7.4 ?
37 HHSearch 49.7931% -16 - C2 -5LTJ 8.1 ?
39 HHSearch 48.8231% -17 - C2 -6QIE 7.3 ?
6 PsiBlast_PDB 42.7497%-134 - C2 -3LLM 6.4 DHX9_HUMAN
44 Fugue 30.7196% -28 - C2 -3LLM 6.4 DHX9_HUMAN