@TOME V3
(Feb 2022)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DLDH_HUMAN: (2020-02-01 )
MQSWSRVYCSLAKRGHFNRISHGLQGLSAVPLRTYADQPIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANLAASFGKSINF

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_8(5J5Z)
DLDH_HUMAN
[Raw transfer]



FAD_A_3(5J5Z)
DLDH_HUMAN
[Raw transfer]



FAD_A_3(6AON)
?
[Raw transfer]



FAD_A_3(6AON)
?
[Raw transfer]



FAD_C_3(1OJT)
?
[Raw transfer]



FAD_B_5(3URH)
?
[Raw transfer]



FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_4(6AWA)
?
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_A_3(2EQ6)
?
[Raw transfer]



FAD_C_3(1JEH)
DLDH_YEAST
[Raw transfer]



FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]



FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_A_3(5TR3)
?
[Raw transfer]



FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_B_4(2A8X)
DLDH_MYCTU
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]
32 HHSearch 99.0999%-106 - C4 -5J5Z 13.7 DLDH_HUMAN
3 PsiBlast_PDB 98.86100%-109 - C4 -5NHG - DLDH_HUMAN -
7 PsiBlast_PDB 98.7099%-109 - C4 -5J5Z 13.7 DLDH_HUMAN
1 PsiBlast_PDB 98.1699%-109 - C4 -3RNM - DLDH_HUMAN -
4 PsiBlast_PDB 97.8599%-106 - C4 -1ZMC - DLDH_HUMAN -
5 PsiBlast_PDB 97.7699%-108 - C4 -1ZMD - DLDH_HUMAN -
6 PsiBlast_PDB 97.0999%-105 - C4 -2F5Z - DLDH_HUMAN -
2 PsiBlast_PDB 96.15100%-102 - C4 -1ZY8 - DLDH_HUMAN -
34 HHSearch 95.61100%-103 - C4 -1ZY8 - DLDH_HUMAN -
10 PsiBlast_PDB 80.9557%-107 - C4 -1DXL - DLDH_PEA -
31 HHSearch 80.3357%-105 - C4 -1DXL - DLDH_PEA -
33 HHSearch 71.2436% -82 - C4 -2A8X 10.5 DLDH_MYCTU
22 HHSearch 70.7354% -36 - C4 -3URH 12.0 ?
25 HHSearch 67.8954% -6 - C4 -2QAE 13.1 DLDH_TRYCR
28 HHSearch 67.2044% -34 - C4 -2EQ9 - ? -
29 HHSearch 66.7644% -33 - C4 -2EQ6 13.2 ?
40 HHSearch 66.1527% -87 - C4 -2R9Z - GASHR_MARGR -
11 PsiBlast_PDB 65.6854% -5 - C4 -3URH 13.0 ?
26 HHSearch 64.7347% 6 - C4 -6AON 13.4 ?
8 PsiBlast_PDB 64.0157% 24 - C4 -1JEH 13.1 DLDH_YEAST
9 PsiBlast_PDB 63.9357% 27 - C4 -1V59 13.3 DLDH_YEAST
20 PsiBlast_PDB 63.8846% 11 - C4 -6AON 13.4 ?
21 HHSearch 63.5049% 8 - C4 -3LAD 12.8 DLDH_AZOVI
15 PsiBlast_PDB 62.9050% 6 - C4 -1LPF 12.3 DLDH_PSEFL
13 PsiBlast_PDB 62.8450% 5 - C4 -5TR3 13.3 ?
30 HHSearch 62.8039% -16 - C4 -1OJT 10.7 ?
19 PsiBlast_PDB 62.7549% 11 - C4 -3LAD 12.0 DLDH_AZOVI
12 PsiBlast_PDB 62.3053% 3 - C4 -2QAE 11.7 DLDH_TRYCR
14 PsiBlast_PDB 61.7850% 6 - C4 -6AWA 13.2 ?
27 HHSearch 60.4138% -22 - C4 -1LVL 10.1 DLDH1_PSEPU
41 Fugue 57.8947% 2 * C4 *3LAD 12.5 DLDH_AZOVI