@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : DNPH1_HUMAN: (2020-02-01 )
MAAAMVPGRSESWERGEPGRPALYFCGSIRGGREDRTLYERIVSRLRRFGTVLTEHVAAAELGARGEEAAGGDRLIHEQDLEWLQQADVVVAEVTQPSLGVGYELGRAVAFNKRILCLFRPQSGRVLSAMIRGAADGSRFQVWDYEEGEVEALLDRYFEADPPGQVAASPDPTT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_A_3(2KLH)
DNPH1_RAT
[Raw transfer]




5GP_B_4(2KLH)
DNPH1_RAT
[Raw transfer]




N6P_A_3(4P5E)
DNPH1_HUMAN
[Raw transfer]




6IA_A_5(4KXM)
DNPH1_RAT
[Raw transfer]




6K6_A_5(4KXN)
DNPH1_RAT
[Raw transfer]




N6P_A_3(4P5E)
DNPH1_HUMAN
[Raw transfer]




6C6_A_5(4KXL)
DNPH1_RAT
[Raw transfer]




TR5_A_5(4FYH)
DNPH1_RAT
[Raw transfer]




N6P_C_3(4P5D)
DNPH1_RAT
[Raw transfer]




6C6_A_5(4FYI)
DNPH1_RAT
[Raw transfer]




SRA_A_5(4FYK)
DNPH1_RAT
[Raw transfer]




41 Fugue 94.2976%-131 - C2 -2KHZ - DNPH1_RAT -
2 PsiBlast_PDB 93.3779%-133 - C2 -2KHZ - DNPH1_RAT -
1 PsiBlast_PDB 93.36100%-149 - C2 -4P5E 9.2 DNPH1_HUMAN
21 HHSearch 93.1499%-149 - C2 -4P5E 9.2 DNPH1_HUMAN
22 HHSearch 93.0178%-132 - C2 -2KHZ - DNPH1_RAT -
9 PsiBlast_PDB 89.4284%-151 - C2 -4P5D 9.3 DNPH1_RAT
10 PsiBlast_PDB 87.9084%-168 - C2 -2KLH 4.6 DNPH1_RAT
24 HHSearch 86.6582%-164 - C2 -2KLH 4.8 DNPH1_RAT
6 PsiBlast_PDB 85.5884%-157 - C2 -4KXL 7.7 DNPH1_RAT
3 PsiBlast_PDB 85.1184%-147 - C2 -4FYH 6.8 DNPH1_RAT
5 PsiBlast_PDB 85.0784%-155 - C2 -4FYK 6.2 DNPH1_RAT
4 PsiBlast_PDB 83.7184%-159 - C2 -4FYI 7.3 DNPH1_RAT
7 PsiBlast_PDB 83.0184%-155 - C2 -4KXM 7.3 DNPH1_RAT
8 PsiBlast_PDB 82.8684%-151 - C2 -4KXN 7.3 DNPH1_RAT
26 HHSearch 51.6820% -55 - C2 -4JEM - ? -
25 HHSearch 48.9519% -40 - C2 -4JEN - ? -
23 HHSearch 46.7619% -24 - C2 -5VTO - ? -
44 Fugue 45.3716% -40 - C2 -1F8X - NTD_LACLE -
27 HHSearch 45.1118% -60 - C2 -4JEN - ? -
35 HHSearch 44.5319% -53 - C2 -4HX9 - NTD_LACLE -