@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EHD4_HUMAN: (2020-02-01 )
MFSWMGRQAGGRERAGGADAVQTVTGGLRSLYLRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISVIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYIQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSNKISPLMNLISQEETSTPTQLVQGGAFDGTTEGPFNQGYGEGAKEGADEEEWVVAKDKPVYDELFYTLSPINGKISGVNAKKEMVTSKLPNSVLGKIWKLADCDCDGMLDEEEFALAKHLIKIKLDGYELPSSLPPHLVPPSHRKSLPKAD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(2QPT)
EHD2_MOUSE
[Raw transfer]




ANP_A_4(2QPT)
EHD2_MOUSE
[Raw transfer]




ADP_A_2(5MVF)
EHD4_MOUSE
[Raw transfer]




ANP_A_3(4CID)
EHD2_MOUSE
[Raw transfer]




ANP_A_3(4CID)
EHD2_MOUSE
[Raw transfer]




AGS_A_2(5MTV)
EHD4_MOUSE
[Raw transfer]




AGS_A_2(5MTV)
EHD4_MOUSE
[Raw transfer]




37 HHSearch 95.7869%-124 - C3 -4CID 8.9 EHD2_MOUSE
21 Fugue 93.6070%-130 - C3 -2QPT 6.6 EHD2_MOUSE
4 PsiBlast_PDB 91.9266%-102 - C3 -4CID 8.9 EHD2_MOUSE
3 PsiBlast_PDB 90.6168%-103 - C3 -2QPT 6.6 EHD2_MOUSE
38 HHSearch 89.2397%-146 - C3 -5MTV 7.2 EHD4_MOUSE
1 PsiBlast_PDB 89.1497%-147 - C3 -5MTV 7.2 EHD4_MOUSE
2 PsiBlast_PDB 88.7997%-153 - C3 -5MVF 8.7 EHD4_MOUSE
26 Fugue 30.4811% 41 - C3 -2J69 - BDLP_NOSP7 -
48 HHSearch 30.2321%-119 - C3 -4AUR - ? -
30 Fugue 30.2014%-103 - C3 -1EGA - ERA_ECOLI -
49 HHSearch 30.1220%-129 - C3 -1EGA - ERA_ECOLI -
28 Fugue 30.0610% 46 - C3 -2W6D - BDLP_NOSP7 -
27 Fugue 29.3513% -84 - C3 -1NRJ - SRPB_YEAST -
7 PsiBlast_PDB 28.7477% -89 - C4 -2KFG - -
54 HHSearch 28.2619% -60 - C3 -4DHE - ENGB_BURTA -
5 PsiBlast_PDB 27.8774% -48 - C4 -2JQ6 - -
36 Fugue 27.7916% 8 - C3 -1KK1 - IF2G_PYRAB -
8 PsiBlast_PDB 27.7077% -85 - C4 -2KFH - -
9 PsiBlast_PDB 27.6677% -81 - C4 -2KSP - -
52 HHSearch 27.1719% -74 - C3 -4DHE - ENGB_BURTA -