Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANPLDHKIKEYLRKLDPTILDIDNIQSISTHKIGLGESNLNYLAIINGKKFNIRINMYPHFPKKSENEFN------SLKIVEPLGITPKVFHYEASKEILGETFIILE-YLDGRSL-NKYKKIGGDVIRKLGVAVAQLHNTNINNIENRLKRHGSSKMDLLNIIKQMIEYINRKRKHYFPIRGVFENVLEKSYKHLQRLNFPIKPSYVLGHGDIDPSNVISS-QRKLKLIDWEDLGLMDPALEIVGLFDSFDLSNKEKELFLKGYLEVREDTSLKKKLPIFLPFQIFRVFCWAIMHIYELGEGETNEVFLKEQDLKEHIDYTEKMFTKCKKAEIIDKDVRWNISEIVPEHYLKLTT
4R77 Chain:B ((20-263))----------------------------LSVEQLG-GMTNQNYLAKTTNKQYIVKF-----FGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIA-PILQTIHTSAKELRGEFAPFEE--IKKYES-------LIEEQIPYAN-----YESVR----NAVFSLEKRLADLGVDRKSCHI----DLVPENFIESPQGRLYLIDWEYSSMNDPMWDLAALFLESEFTSQEEETFLSHY-ESDQTPVSHEKIAI---YKILQDTIWSLWTVYKEEQGE----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1024 29994 29.29 127.63
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 29.29
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.267

(partial model without unconserved sides chains):
PDB file : Tito_4R77.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r77-query.scw
PDB file : Tito_Scwrl_4R77.pdb: