Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAAEMGMAETADLRTRLAPLFPGREISLRSAAAPVASPLHRAVASACVLAQPDGADPLFLKLAHPDMQDDLLDTDGAAARLAARAGVAPALVLARPGLLGFAYLALPWRYARTGDLQPPATLAAVLAAKKRLH-EGDNLGRRFCPFTRIAQLQAQAEAAQVPLPAETAPLLRQAALIQQALIASGMDLRFCHNHAAASNIMLNGSQMMLVDFDIGGDNDPWYDVGALLNEVCDFDAPRRAAIE--AYAGRCDEALFARCRLYGAVDDLMWGLWGFTR-AVTAPRDGIEFWKYGTWRLFQARTTMTMRDFELWLRTV
3DXQ Chain:A ((103-297))-----------------------------------------------------------------------------------------------------------------------PGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLS--NVTLPAGYHDVVREAGGVRSALAAHPLPLAACHCDPLCENFLDTGERMWIVDWEYSGMNDPLWDLGDLSVE-GKFNANQDEELMRAYFGGEARPAERGRVVIYKAMCDLLWTLWGLIQLANDNPVD--DFRAYADGRFARCKALMETPEFSRHLAAV


General information:
TITO was launched using:
RESULT:

Template: 3DXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 798 -43271 -54.22 -228.95
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -54.22
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_3DXQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxq-query.scw
PDB file : Tito_Scwrl_3DXQ.pdb: