Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSDYVDDESSVRINRKMELIKVPDESAGNAMIGISYLTREDGKIIADRIKELCNESRYNNSFWEEALYIKDKMMVSAKTVSSKDVIEINTYEQLREIDENSDQLDTDAISVICEAFKINKNDIYNITVLKKGMTNRSFLFECKGKKYIMRIPGEGTDMLINRREEAEVYNV-VNKEKICDNVIYI-NPDNGYKITEFIENSRVCDPFNEDDVKRCMDK----LRTFHNLKLKVNHEFNILGQMKFYESLWNEKSVYDDYELTKANVLSLKKYVEDNVSEKVLTHIDAVPDNFLFAGD-EIRLIDWEYAGMHDPHVDIAXXAGMQDPHVDIAMFAIYSLYDREQTDRLIDAYFTGNCDKKTRLKIYCYIAMCGLLWSNWCEYKRQLGVEFGEYSLRQYRYAKDFYRIFINESEQIKEELK
4R77 Chain:B ((27-276))------------------------------------------------------------------------------------------------------------------------------------GMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEK--YNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTS---IKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMNDPMWDLA------------ALFLESEFTSQEEETFL--SHYESDQTPVSHEKIAIYKILQDTIWSLWTVYKEEQGEDFGDYGVNRYQRA-------------------


General information:
TITO was launched using:
RESULT:

Template: 4R77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1069 10430 9.76 42.92



3D Compatibility (PKB) : 9.76
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?

(partial model without unconserved sides chains):
PDB file : Tito_4R77.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r77-query.scw
PDB file : Tito_Scwrl_4R77.pdb: