Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIDTDSLKNARFYATKTEPITDVDIVAEAPLERPELIKGKDAPGILTFARVHREGGSDLYQLVVDKQGRDILGEEETARAAGKQLSNGYAVGSGVLHKLTDPALPPVETVRAVGEQSNTSWIYNDRVIVKYFRRLTPTPNPEIELLEELTAAGCTHSAPLRGWTSVDIEGHTYVTAMLQDLVPGT-DGYDY-VTGTPDAF----------------DATALGEAIRDVHTVLASTCETGTLAPGALATNLDRRLTGLVGRAPQLKEYEEKIRALYSTLAETSVPTQRIHGDLHLGQTLVDGDSWALIDFEGEPAASLEERRRPDSPLRDVAGMIRSFGYAAAASGQDQS----------------WADARTAELIAGY-GEA-----DEA-ILRAYIADKCAYEVVYELENRPHMVHVPLDALASLV
5JY7 Chain:I ((129-439))-----------------------------------------------------------------------------------------------------------------AEQSNTSVVFGEDAIFKLFRRITPGVHPDIELNRVLARAGNPHVARLLGSFETEWEGEPYALGMVTEFAANSAEGWDMATTSTRDLFAEGDLYAEEVGGDFAGEAYRLGEAVASVHACLAH--ELGTEEVPFPADVMAQRLAAAVDAVPELREHVPQIEERYHKLADTTMTVQRVHGDLHLGQVLRTPKGWLLIDFEGEP---LDERRRPDTPVRDVAGILRSFEYAAHQRLVDQAGDDDDRARQLAARAREWVTRNCASFCDGYAAEAGTDPRDSADLLAAYELDKAVYEAAYEARHRPSWLPIPLGSIARL-


General information:
TITO was launched using:
RESULT:

Template: 5JY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 1148 6476 5.64 24.25
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain I : 0.73

3D Compatibility (PKB) : 5.64
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.264

(partial model without unconserved sides chains):
PDB file : Tito_5JY7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5jy7-query.scw
PDB file : Tito_Scwrl_5JY7.pdb: