Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKSSSKIGGEYGEVRATIDVNKLNAYLKDKVPRVKAPVDVKQFKFGQSNPTYFLTDASNTRWVLRKKPAGQLLSTTAHQIEREYTILNAIHRHNVKSSTPSEQNVPVPEPIILCEDKEIIGTPFYIMEFLDGRIFTNPRMPEIPENDRRECWLSAVRALAALSSLVPQELGLSNFAPMTPYFPRQIKSLSRVSQVQSEAADVETGIPTGKIPKFDEMIAWYRSHLPDESKTGSRIVHGDYKIDNMIFHPTENRVIGILDWELCTLGSPLADLANLTQPWSVDPSQIPEEYRVSLLRGFKNQTDDIPIDLETLEREYCRLTHQPYPITEMVFARSWMLFRLSVISQGIAARYARRQASSEQAFLHVKLFPIVGELAIRVLEDAGHVLELKSKL
3DXP Chain:A ((21-337))------------------FDTEALEAWMRQHVEGFAGPLSVEQFKG-QSNPTFKLVTPGQT-YVMRAKPG---------AIEREYRVMDAL----------AGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTK----QYKLSETES------IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQF------RGIAGLDHAALGIP-DEASYRKLYEQRTGRPI-TGDWNFYLAFSMFRIAGILQGIMKRVVDGTASSAQAL------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1370 -171122 -124.91 -559.22
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -124.91
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_3DXP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3dxp-query.scw
PDB file : Tito_Scwrl_3DXP.pdb: