Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSYEFN-VTQLRDLPFGDKNIKIITEKKGGWDSRFFILDGKVAVKVPRNITVQHSIIKEKIVTDLLRKELPLPIPDMNLAEIDSIDGNKIIIVIYEMLPGIELQNIHII---GENKIKTSKSLGLFLQKLHNI-----PDELAQILRSGISNVNNERNETDLELLNSVLEYFEEMRNKTNVSSYIEIMRTSMGSLKQMGTKIVPC--HGDFMSNNILYNEIEGKISGIIDWGDFSFRNPIYDFAGL---TYEFGEEFLDSMLAAYASNTSPDFREKIVKLSRFVPFITVYFSRHMKKKIRFEKKYIKIELLESGRNQILHVR
4DTB Chain:A ((1-296))MRTYTFDQVEKAIEQLYPDFTINTIEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS-ETYQMSFAGYTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKI----NEDNKKIKKLLSRELK-GPQMKKVDDF--YRDILEN------EIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSF----------EKIIYGKEYGYMDWYEEGLNEIR---


General information:
TITO was launched using:
RESULT:

Template: 4DTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1265 53095 41.97 188.28
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 41.97
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.332

(partial model without unconserved sides chains):
PDB file : Tito_4DTB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dtb-query.scw
PDB file : Tito_Scwrl_4DTB.pdb: