Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIQTVLSDLKLN--GKVIPVVGGDVNQTYRIKTE-HRAYFLKIHPNV-KKGFFEAEVDGLKELSAF--VRVPDTYMLGETS-EGAY----LLMEWIE-PG--K--------GDQRDLAAALANLHQQTAPQFGFRKDNYLGTLVQKNSFEEDWWTFFFKDRLESQISLAEETNRWNVQRQEKYLRFKERVLKSVEPKKITPRLLHGDLWSGNVFFDQQ-GHPVFVDPA-VSYGNREQDIAMSQLFGG--FRPEFLDAYQTIFPLE-K----GWKDRLPIYQLYYLLAHLNMFGESYGSQVDQLLENF
5IGI Chain:A ((12-299))--LYALAARHGLKLHGPLTVNELGLDYRIVIATVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVPDWRVANAELVAYPMLEDSTA-VIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAG--MLI--RTPTQARQKVADDV-----DRVRREFV----VND---KRLHRWQRWLDDDSSW-PDFSVVVHGDLYVGHVLIDNTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALDSGNEEYLAAAKAQLAA-


General information:
TITO was launched using:
RESULT:

Template: 5IGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1152 -18021 -15.64 -70.39
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -15.64
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.278

(partial model without unconserved sides chains):
PDB file : Tito_5IGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igi-query.scw
PDB file : Tito_Scwrl_5IGI.pdb: