Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSDEASRFLAELGIADDSVTPITGGWASWTFATGSGRILRVARNPEIDAAHRRESRLLPELAEAVSFAVPAPTHFGVHKGMTYMVYPRLPGRG---LEPGDRV-------------RAVAPMLAELHAFPVDRAAELLGCAVTAEAWRDDYLEIGKWVEGEVLPVLDGELRDRVRR--EYDATLPDLAAISPALIHRDLGCEHILTDPETGMPTGIIDFETATVGDPAIDYVGLLVTFGEQVTRELI---AASGSEISWRLVRFYHWLGAAHAVKYGLAERDDAIVADGIEGLRRRLPG
5IGR Chain:A ((42-283))------------------------------TVDDGRRWVLRIPRRAEVSAKVEPEARVLAMLKNRLPFAVP---DWRVANA-ELVAYPMLEDSTAMVIQPGSSTPDWVVPQDSEVFAESFATALAALHAVPISAAVDAGMLIRTPTQARQKVADDVDRVRREF--VVNDKRLHRWQRWLDDDSSWPDFSVV----VHGDLYVGHVLID-NTERVSGMIDWSEARVDDPAIDMAAHLMVFGEEGLAKLLLTYEAAGGRVWPRLAHHIAERLAFGAVTYALFALD-----------------


General information:
TITO was launched using:
RESULT:

Template: 5IGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 906 -45664 -50.40 -206.62
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -50.40
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_5IGR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5igr-query.scw
PDB file : Tito_Scwrl_5IGR.pdb: