Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLTDQSTRIRAGEELDAAVIDPYLKAHIPGLEGTP-KISQFPGGASNLTYLIEYPRQEFVLRRPPFGHKAKSAHDMGREYRILNQLN-A---GFPYCPKAYLYCTDESVIGAEFYVMERVKGIILRAELPPELNLDEQQTRSLCKSFIDKFVELHNVDYAACGLADLGRPDGYV---QRQIAGWTDRYEKALTPDAPLWEPVKAWLKDKQPADHHKPGIVHNDYRFDNVILDPENPMQIIGVLDWELATLGDPLMDLGNTLAYWVEAGDPAPVQLTRRQPSHLPGMLTRREFADYYAERAGIPPIDNLDFYYTYGLFRLAGIVQQIYYRYYHGQTQDKRFAQFVQMNKLLEQMSLQAIERSRL
5IQC Chain:A ((7-257))------------DNATNVKAMKYLIEHYFDN--FKVDSIEIIGSGYDSVAYLVN---NEYIFKTKFSTN---KKKGYAKEKAIYNFLNTNLETNVK-IPNIEYSYIS---DELSILGYKEIKGTFLTPEIYS--TMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLT---DIEKDYIESFMERLNATTVFEG-KKCLCHNDFSCNHLLLDGN--NRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEI----------------GTNFGEDILRMYGN-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 986 -14857 -15.07 -61.14
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -15.07
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_5IQC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqc-query.scw
PDB file : Tito_Scwrl_5IQC.pdb: