Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIEISLNKINKSYGFNPILKDFSFEIKSGERIALIGPNGCGKTTTLRIIMGE-DIDSGSINIRKGARV-GYLSQIPN-KE------KDNVKAKEVFYRGVKELIELENNINEFVKNMNSSEKSIKALDRLQEEFRIKGGYQLNERINKIKNGFKLSDELLDTEYNNLSGGEKTIINLASLVLSEVDVLLLDEPTNHLDIETLEWFEEYLNNY---KGACLIVSHDRYFLDRVINKIVEIKNCKEEVYYGNYSYYLKESEKRFLLQFQSYKNQQKEITAIKEAIVRLKEWGTKSDNPMFFRRAAAMQKRLDRMELIDKPVEKSELKVNFVTTDRSGNEVLKIKNLDLNIGSRELLVSSNMEIYYQDRVCLMGRNGTGKTTLIKNIIN---NTHDNIILGTNIKIGYIPQEIRFDNEELTIYEHMRKIFV---GSESELRSKLNRFYFGSEEIDKKLKNISGGEKVRIKLLELILLKSNFLILDEPTNHIDIDTREILEEALLDF----DGTILFISHDRYFINKIATRIVRIENKKLVSYEGNYDSLKVKTVPVIENTIKETPQVINIKGSNRLNEFIKDAKIEEVTIGCSNTKVYKIRKKSKVFFLKVADHLSQESIRLDYLQDKILVPEKVFYEKYNGKSYILTKSLKGEMLCSDYYSNHPLEGINIIVEAFNNLYNIDYSDCVIDETIDTKIKRIEDRFSKINNEDINKKILNRFITKENILKYLKGNKPKQIIGFTHGDMSLPNIFACDGHFSGLLDVSECGLGDIYFDLVICEISIERNYGKEYIDKFYESLGIEKDEFKSEYYRILMSL
5YV5 Chain:A ((22-485))-----EEDCVHRYGVNAFVLYRLPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQYVDLIPKA--VKG-------------KVIE----------LLKKADETGKLEEVVKALELEN-VLDREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDI-IHVVYGEPGVY-GIFSQPKGTRN---------------GINE---FLR--GYLKDE-NV--RFRPYE---IKFTK------TGERV---------EIERETLVTYPRLVKDY-GSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDL--TVAYKPQYIK-ADYEGTVYELLSKIDASKLNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLMVFEGEPGK-YGRALP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2328 25698 11.04 58.14
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 11.04
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.183

(partial model without unconserved sides chains):
PDB file : Tito_5YV5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5yv5-query.scw
PDB file : Tito_Scwrl_5YV5.pdb: