Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQNKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGC-VKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVFPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSE---AVEDQVF--PLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLED----CGELFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDW-ISEGLELLEEDKANNFGANSA
4DCA Chain:A ((26-316))---DAEIYEHLNK----QIKINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQS-----DRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSD--ALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIF--RN--NRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYERKDREMLIKDVSELLQTQAE--------


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1150 -25797 -22.43 -92.13
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -22.43
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: