Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTARAEAGSALRRRFGTPDSRTSDELPNTTLDLLIGSSGGALLAEIVGERGGEVVGWSVRQVDHRPGVSVTVTYRCDVRWGDGLRRETLGASIGRPKHHDAPGVRTLDVDGQPAAVWMFPDDPGLPALRTALDPAAVGRLLGHHPVETTLRAYRPTRRAVVEATTPGGRVFLKVLRPAKAEALRRRHLLLTGAGVPVPDVLDHRGDGLLVLAPLAGTTLRDAVRTGGLVPSPRELLDVLDRLPAELCDQPRRAAWSENADYYATLVGAALPAEADRAATLADRVLDRIAGLPDDGPTHGDFYEAQLLLTGGRLTGVLDVDSAGPGRRADDLACLVAHLETLSLMPGWDGPRLRRLAREYAAAFAADLARRGTDPAELNARIAGVLLSLATGPHRVQEPDWQAQTAARLSAADAWLTPARHGSRGLRYGDPMGRIVFMCGPAGAGKSTYARRLEAD-GFVRLSIDAAAWAAGHREQ----PLAEPVRSRFEREVQERLVALAADGADVVVDLSFWSRRMRDTYRALLAPLGVVPETVYLATPRDVVLARVAARTGSHADDVVLDEATAALYSDHFEAPTADEGPLTVVTPSG---------------
1KNQ Chain:A ((3-173))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCS----ALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETL-----QEPGADETDVLVVDIDQPLEGVVASTIEVIKK


General information:
TITO was launched using:
RESULT:

Template: 1KNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 663 12354 18.63 81.81
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 18.63
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.115

(partial model without unconserved sides chains):
PDB file : Tito_1KNQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1knq-query.scw
PDB file : Tito_Scwrl_1KNQ.pdb: